| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3260 |
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| Symbol | |
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| ID | 5454323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3482089 |
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| End bp | 3483402 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878851 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_001414522 |
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| Protein GI | 154253698 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.854773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAA CCGCGACGCA AAATTTTGTC GAGACCTACA ACCGGACGCA TGAGGTGCTG
CCCGGCGCCG GAGGCTGGCT TTCGCGCCGA CGCGAGACGG CGCTGAAAGC TTTCATGGAA
GCAGGGCTCC CGCATCGTCG CCTTGAGGAA TGGAAGTATA CCGATCTTCG GCAGGTGCTC
GATAAGGCCG CATTCGCATC TGCCCCCGCG CATGAGGGCG CGGTCATTCT GCCGGAGGGC
GGAGCGGCCG CCGCATTCGC AGCGATCGAC CGATATACGG TCGTTTTCGT AAATGGCAGC
TATCGTGCGG ACCTCTCGAA TACAGCGCGA TTGCCGAAGG GTGTTGAGTT GCGTCCACTT
GCCGACGCTG TTCCTGAGCA ATGGGCAAAG GATCTTGTCG AACGCCGTCT CGACGATGCA
CGCCAAGCTG AAGGAGTGGT CGATCTCAAT ACAGCGTTGA TGAGCGACGG TACCTGCTTG
CGGATTCGAA GTGGCGTGAA GCTCGACAAG CCGCTTCATT TGCTGTTTGT CACGGCGGAT
GCAGGTGCAT CCCATGCGCG AAACCTCATT CTGCTTGAGA AGGAAGCGGA AGCGACGATT
TTCGAAACGC ATATCGGATC TGCTGCCGGT TTTTCCGATA TCGTGACGGA TATAGCGCTA
GCGGAATGCG CGCGGCTCGA CCATCTGAAA CTTCAGGATG AGGCACCGGG CGCCGTTCAT
CTGGCGACGA TGCGCACAAG CCTTGAAGCA AACGCCTATT TCGCGAGCTT CACGTTGACA
CTGGGCTGCG GCGTCTCGCG CGGTCAGAAC TTTGTACGTT TCGCTGGCGA GGGCGCGAAA
GCCCATGTGA ACGGGGCCTA CGCGCTCAAA GACAAGCAAC ATTCTGACCA ATTCTGTGTG
ATCGATCATG CCGTGCCTGG CTGCACCAGC CACACTCTCT TCAAGGGCGT GCTGGACGGC
TCTTCGGAAG GTGTTTTTCA AGGCAAGGTC ATCGTGCGGC CACATGCGCA GAAAACGGAT
GGCAGGCAGA TGACGCAGGC GCTGCTCTTG TCGCGCGATG CTGCGATGAA CGCCAAGCCA
GAGCTTGAAA TCTACGCGGA TGATGTGCAA TGCGCGCACG GCTCCACTGT TGGCGAACTC
TCCCGGGATG CCATTTTCTA TCTGCGTTCG CGCGGCATAC CGGAGCTTCA GGCTCGCCAG
CTTCTGATCT CGGCTTTTCT CGATGAATCG CTCGACCTCG TGCCACACGA AGCGGCACGA
GATGCGCTCA AGTCGCTCAC TGCCGAATGG TTTGCTGCGG AGGCGCAGGT ATGA
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| Protein sequence | MTETATQNFV ETYNRTHEVL PGAGGWLSRR RETALKAFME AGLPHRRLEE WKYTDLRQVL
DKAAFASAPA HEGAVILPEG GAAAAFAAID RYTVVFVNGS YRADLSNTAR LPKGVELRPL
ADAVPEQWAK DLVERRLDDA RQAEGVVDLN TALMSDGTCL RIRSGVKLDK PLHLLFVTAD
AGASHARNLI LLEKEAEATI FETHIGSAAG FSDIVTDIAL AECARLDHLK LQDEAPGAVH
LATMRTSLEA NAYFASFTLT LGCGVSRGQN FVRFAGEGAK AHVNGAYALK DKQHSDQFCV
IDHAVPGCTS HTLFKGVLDG SSEGVFQGKV IVRPHAQKTD GRQMTQALLL SRDAAMNAKP
ELEIYADDVQ CAHGSTVGEL SRDAIFYLRS RGIPELQARQ LLISAFLDES LDLVPHEAAR
DALKSLTAEW FAAEAQV
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