Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3225 |
Symbol | |
ID | 5453450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3442905 |
End bp | 3443480 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878814 |
Product | NADH-quinone oxidoreductase, B subunit |
Protein accession | YP_001414488 |
Protein GI | 154253664 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.11443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.943012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGTGA CGAACCCCGA CAAGGTAATC TCCAACACGC CGGGCGTGGT CGATCCCGCT ACGTCGGTTC CGGCTTGGCA GGATGATGCT TTTTTCCGTC AGGCGACGGA CCAGCTTGCC GACAAGGGCT TTGTGCTGAC GACGGTTGAT GATCTCATCA ACTGGTCGCG CACCGGCTCG CTGATGTGGA TGACCTTCGG TCTCGCCTGC TGCGCGGTCG AGATGATGCA GACCTCGATG CCTCGCTACG ATGCCGAACG CTTCGGTGTC GCGCCCCGCG CCAGTCCGCG CCAGTCCGAC GTGATGATCG TCGCCGGCAC CTTGACGAAC AAGATGGCGC CGGCGCTGCG CAAGGTCTAT GACCAGATGC CGGAGCCGCG CTATGTGATC TCGATGGGGT CATGTGCGAA TGGCGGCGGT TACTACCACT ACTCCTATTC CGTGGTGCGC GGCTGCGACC GGATCGTCCC GGTCGACATC TACGTGCCCG GCTGTCCTCC CACCGCCGAG GCGCTGCTTT ACGGCATCCT GGCGCTTCAG AAGAAGATCC GTCGGACGGG TACGCTCGAC CGCTGA
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Protein sequence | MGVTNPDKVI SNTPGVVDPA TSVPAWQDDA FFRQATDQLA DKGFVLTTVD DLINWSRTGS LMWMTFGLAC CAVEMMQTSM PRYDAERFGV APRASPRQSD VMIVAGTLTN KMAPALRKVY DQMPEPRYVI SMGSCANGGG YYHYSYSVVR GCDRIVPVDI YVPGCPPTAE ALLYGILALQ KKIRRTGTLD R
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