| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3220 |
|---|
| Symbol | |
|---|
| ID | 5454103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3437090 |
|---|
| End bp | 3439132 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640878809 |
|---|
| Product | NADH dehydrogenase subunit G |
|---|
| Protein accession | YP_001414483 |
|---|
| Protein GI | 154253659 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAC TGATAGTCGA CGACATCGAA GTAGAAGTCG AAAACGGCGC CACCGTGCTG
CAGGCATGCG AGGAAGCCGG CGCCGAGATT CCGCGCTTCT GCTACCACGA GCGTCTCTCC
ATCGCGGGCA ATTGCCGCAT GTGCCTCGTC GAGGTCGAGA AGTCGCCCAA GCCCGTCGCT
TCCTGCGCCA TGCCTGCCGC CGAAGGCATG GTCGTCCGCA CGAAGACCGA ACAGGTGAAG
CGCGCCCGCG AAGGCGTGAT GGAATTCCTC CTCATCAACC ACCCGCTGGA TTGTCCGATC
TGCGATCAGG GCGGCGAATG CGACCTGCAG GATCAGTCGA TGGCCTATGG CGTCGACGGG
TCGCGCTTTC ATGAGAACAA GCGCGCGGTC GAAGAAAAAT ACATGGGCCC CCTCGTCAAG
ACCGTGATGA CGCGCTGCAT CCATTGCACG CGCTGCATTC GCTTCTCGAC CGAAGTCGCC
GGTGTACCGG AGCTCGGCGC CATTGGCCGT GGCGAGGATA TGGAAATCAC CACCTATCTC
GAGCACGCGC TGACATCCGA GCTTTCCGCC AATGTGGTCG ATCTCTGCCC CGTCGGCGCG
CTCACCTTCC GCCCCTTCGC CTATACGGCC CGCCCTTGGG AACTCCGCAA GACGGAATCG
ATCGACGTCA TGGATGCCGT CGGCTCCAAC ATCCGCGTCG ATGCGCGCGG CGCCGAAGTC
ATGCGCATCC TCCCGCGCAA CAATGACGAC GTGAATGAGG AATGGATCTC GGACAAGACG
CGTTTCGTCT GGGACGGCCT GAAGACGCAG CGCCTCGACA CGCCTTATGT CCGCGAGAAC
GGCCGCCTCC GCGCCGCAAG CTGGGATGAG GCCTTCGCCG TCATCGCCGC CCGCCTGAAG
GGTGTCGATG GGTCCCGCGT CGCCGCCATC GCGGGCGACC TCGCTTGCGC CGAATCCATG
AAGGCGCTGA AGGATCTCTA CACCGCCCTC GGCTCGCCCA ACATCGATTG CCGCCAGGAC
GGCGCAAAGC TCGATGCATC TAACCGTGGC AGCTACCTCT TCAACACAAC CATTGCCGGT
ATCGAGGAGG CGGACGCGGT CCTCTTGATC GGCACCGCCC CCCGCAAGGA AGCAGCCATT
ATCAATGCGC GCATCCTGAA GCGTGCCCGT ATGGGCGGCC TCAAGGTCGG CGTCATCGGC
CCCCGCGCCG ATCTCACCTA TGATTACGAC TATCTCGGCG CCGGCCCGCA ATCGTTGAGT
GACCTCGGGT CCTTCGGCGA CGTGCTGAAA AATGCCGCCA ACCCGATGAT CATTGTGGGG
CAGGGCGCCC TCACGCGCGC CGATGGCGCG GCCGTGCTTG CCGCCGCGCT CTCGCTCGCT
CAATCCGTCG GCGCGGTCCG CGAAGGCTGG AACGGCTTCA ACGTCCTCCA CACCGCCGCC
TCCCGCGTCG CCGGTCTCGA TCTCGGTCTT GTGCCGGGCG AGGGCGGCCG CGATGTCGCG
GGCATTCTCG ATGGCGCCTC GAAAGGCGAC ATCGAAGTCG TGCATCTCCT CGGCGCCGAC
GAAATCGACA TGTCGCGCCT CGGCTCCGCC TTCGTCATCT ATCAGGGAAC GCATGGCGAT
GCCGGCGCGC ACCGTGCGGA CGTCATCCTG CCGGGCGCCG CCTACACCGA AAAGAATGCG
CTCTGGGTAA ACACCGAGGG CCGTGTGCAG GCCGGCCGCC GCGCCGTCTT CCCGCCCGGT
GCCGCCCGCG AGGACTGGGC GATCCTGCGC GCCCTCTCGG CCGCCCTCGA CGCGACGCTC
CCCTATAACG ACCTCGCCGG TATCCGCGCC GCGATCGAGG CCCAGGCGCC CCATTTCGCG
CTGCTGGATA TGATCGTCCC GGCCGCAGAT TTGCCGCGTC TCGAGTCGGG TGATCTCGAT
GCCGCCCCGT TTGAAACGCC GGTGCAGGAT TTTTATCTGA CGAACCCGAT CGCGCGGGCA
AGCGCCGTCA TGGCCGAGTG TTCGGCCGGC CGCGCCGCCG CGCGCGTTCA GGCGGCAGAG
TGA
|
|---|
| Protein sequence | MPKLIVDDIE VEVENGATVL QACEEAGAEI PRFCYHERLS IAGNCRMCLV EVEKSPKPVA
SCAMPAAEGM VVRTKTEQVK RAREGVMEFL LINHPLDCPI CDQGGECDLQ DQSMAYGVDG
SRFHENKRAV EEKYMGPLVK TVMTRCIHCT RCIRFSTEVA GVPELGAIGR GEDMEITTYL
EHALTSELSA NVVDLCPVGA LTFRPFAYTA RPWELRKTES IDVMDAVGSN IRVDARGAEV
MRILPRNNDD VNEEWISDKT RFVWDGLKTQ RLDTPYVREN GRLRAASWDE AFAVIAARLK
GVDGSRVAAI AGDLACAESM KALKDLYTAL GSPNIDCRQD GAKLDASNRG SYLFNTTIAG
IEEADAVLLI GTAPRKEAAI INARILKRAR MGGLKVGVIG PRADLTYDYD YLGAGPQSLS
DLGSFGDVLK NAANPMIIVG QGALTRADGA AVLAAALSLA QSVGAVREGW NGFNVLHTAA
SRVAGLDLGL VPGEGGRDVA GILDGASKGD IEVVHLLGAD EIDMSRLGSA FVIYQGTHGD
AGAHRADVIL PGAAYTEKNA LWVNTEGRVQ AGRRAVFPPG AAREDWAILR ALSAALDATL
PYNDLAGIRA AIEAQAPHFA LLDMIVPAAD LPRLESGDLD AAPFETPVQD FYLTNPIARA
SAVMAECSAG RAAARVQAAE
|
|---|
| |