| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3178 |
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| Symbol | |
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| ID | 5454505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3390537 |
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| End bp | 3391250 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878767 |
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| Product | LexA repressor |
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| Protein accession | YP_001414441 |
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| Protein GI | 154253617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.917089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAC GCAAGCAACA TGAGCTGCTG ATGTTTATTC ATGAGCGGAT CAAGGAAGGC
GGCGTTTCCC CCAGCTTCGA TGAAATGAAA GAGGCGTTGG ACCTTCGCTC CAAATCCGGC
ATTCACCGGC TCATCACCGC GCTGGAGGAA CGAGGCTTTA TCCGCCGCCT GCCCCATCGC
GCTCGCGCAC TTGAAATTCT CAAGCTTCCC GATGCGGCGT CCCCAAGCCT CGCCATGGCA
CGCGGACGGG GCTTTTCGCC GAGCGTTATC GAGGGCGGCG CGCAGCCCAA ACCCAGCAGC
CGGGACCTTG CCCCCGCACG CAGCTCCGGC GATACGATGA CCCTCTCCGT CATGGGACGA
ATTGCTGCCG GCACACCGAT CGAGGCATTG CAGGAAGAGA GCCATCAGGT CAGCGTGCCG
CTGAACCTTC TCGGATCCGG GGAGCATTAT GCGCTTGAGG TAAAAGGCGA CTCGATGATC
GAGGCCGGTA TCCTCGACGG CGATACGGTT CTCATCCAGC GTTGCGATAC AGCAACGAGC
GGCGACATCG TCGTTGCACT CGTCGATGGC TATGAAGCCA CCCTGAAGCG CCTGCGCAAG
AAGGGAGATT CCATCGCTCT CGAAGCCGCA AATCCGGCCT ATGAGACGCG TATCTTCGGA
CCTGACCGGG TCAAGGTTCA AGGAAAGCTC GTCGGCCTTC TTCGCCGCTA CTGA
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| Protein sequence | MLTRKQHELL MFIHERIKEG GVSPSFDEMK EALDLRSKSG IHRLITALEE RGFIRRLPHR
ARALEILKLP DAASPSLAMA RGRGFSPSVI EGGAQPKPSS RDLAPARSSG DTMTLSVMGR
IAAGTPIEAL QEESHQVSVP LNLLGSGEHY ALEVKGDSMI EAGILDGDTV LIQRCDTATS
GDIVVALVDG YEATLKRLRK KGDSIALEAA NPAYETRIFG PDRVKVQGKL VGLLRRY
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