Gene Plav_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3174 
Symbol 
ID5453880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3387313 
End bp3387822 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content54% 
IMG OID640878763 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001414437 
Protein GI154253613 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.358356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.62215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACC ACATAAGACA GGCAAAACCT GAAGAGTTTC AACTGTTTGG CGCCATAGAA 
CGGGCCGCAA GCAAGGCTTT CATCGAAGCA GGCCTTCCGG AGATCGCTTC GCATGAACCA
ACCGACATAA AATTCATCAA AGCCAACGCC CGCAGCGGTG TCGTATTCGT CTCTGTACTG
AACGATAATC CGGTCGGGTT CATCCTCGCG GCGCCTCTGG ACAGACCTTT CCATATCTTC
GAATTGTCAG TCCATCCGGA TCACGGACGC AAGGGTATGG GGCGTTCTCT CGTCGAATCC
GTATGCGATT GGGCAAGGGA AAACGGCTCG AAATCCGTTA CATTGTCGAC CTTCCGCGAC
ATCGTATGGA ACGCACCGTT CTATGCCTCA TGCGGTTTCA AGATCATTCC CGAGGATGAG
TGGACGCCGG CCCTCCTCCT CGCGCATTAT CACGAAGACG ACATCGGACT GCCGCTCGAC
CGGCGATGTT TCATGCGCAA GGATCTGTAA
 
Protein sequence
MNYHIRQAKP EEFQLFGAIE RAASKAFIEA GLPEIASHEP TDIKFIKANA RSGVVFVSVL 
NDNPVGFILA APLDRPFHIF ELSVHPDHGR KGMGRSLVES VCDWARENGS KSVTLSTFRD
IVWNAPFYAS CGFKIIPEDE WTPALLLAHY HEDDIGLPLD RRCFMRKDL