| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3161 |
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| Symbol | |
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| ID | 5454772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3374651 |
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| End bp | 3374860 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878750 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001414424 |
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| Protein GI | 154253600 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.161902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.108125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAACG GAACAGTTAA GTGGTTCAAC TCCCAGAAGG GCTTCGGCTT CATTCAGCCG
GACGGCGGCG ACAAGGACGT TTTCGTCCAC ATCTCCGCAG TTGAACGCGC GGGCATGAGC
TCGCTCAACG AAGGTCAGAA GATCGGTTAC GATCTGGAGA CCGACCAGCG CAGCGGCAAG
GTCTCGGCCG CCAACCTGCG CAACGCCTGA
|
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| Protein sequence | MANGTVKWFN SQKGFGFIQP DGGDKDVFVH ISAVERAGMS SLNEGQKIGY DLETDQRSGK
VSAANLRNA
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