| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3127 |
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| Symbol | |
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| ID | 5454652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3337870 |
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| End bp | 3339264 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878717 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001414391 |
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| Protein GI | 154253567 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.816597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTG ATATTCTGAT TGTCGATGAT GAAGCCGATA TCAGGGAGCT GGTGTCGGGC
ATTCTGAACG ATGAAGGCTA TGACACCCGC AGCGCGGGCG ACAGCGATCG TGCGCTCGCG
GCGATAGAGG CGCGCCGGCC GGGGCTCGTC ATCCTCGACA TCTGGTTGCA AGGCAGCAAA
CTCGACGGGC TGGAGGTTCT CGACGTTATC CGTGAGCGGC ATCCGGACCT TCCCGTCATC
ATCATCAGCG GTCACGGCAA TATCGAAACG GCCGTCTCCG CCATCAAGAA AGGCGCCTAC
GACTTCATTG AAAAGCCCTT CAAGGCGGAT CGCCTCATTC TGGTCGTGCG CCGCGCGATT
GAAACTTTCC GCTTGCGCCG GGAAAACAGT GAGCTGCGCG TCCGGGTCGG TGACGACACC
ACCTTGATCG GTTTTTCTCC CGCCATGGCG CAGGTGCGTC AGACGATTGA CAAGGTTGCA
CCGACAAACA GCCGCGTCCT CATCACGGGT GCCTCCGGTG CGGGCAAGGA GGTGGTCGCC
CGCCTTCTGC ATGCCCGCTC TCGCCGTGCG GGTCATTCCT TCGTCGCCAT CAATGCGGCA
AACATGGCGC CGGAGCGCAT GGAGATCGAG CTTTTCGGCA CGGAGGAAAG CGCCGCCGGT
CCGAGAAAGG TCGGCGTTTT CGAGCAGGCG CATGGCGGCA CACTATTCCT CGATGAAGTT
GCCGAGATGC CGGTGGAGAC GCAGAGCAAG ATCCTGCGTG TGCTGGTCGA TCAGACATTC
GAGCGCGTCG GCGGCGGCTC GCGCGTCAAA GTGGATGTGC GCGTCGTTTC CTCGTCCAGC
CACGACCTGC TTGAGGAAAT CGCAAAAGGC CGCTTCCGCG AAGACCTTTA TCATCGCCTG
AACGTGGTGC CGATTTTCGT GCCTCCGCTC GCCTCGCGGC GCGAGGATAT CCCCGCGCTT
GTCGAGTACT TCATGGAATT GATTTCCAAG GGAACAGGCC TGCCAGCCCG CCGCGTGTCG
GAAGACGCCA TGGCGGCACT CCAGGCGCAT GACTGGCCGG GCAATGTCCG GCAGCTGCGC
AATAATATCG AGCGCCTGCT GATCCTGACA TCCGGCGATC CGACGGCCGT TGTCACCGCC
GATATGCTTC CCTCCGAAGT GGGCGCATCC GCGCAGATGA CGGTCAACGG CGCCGGCGGC
GAGCACATCA TGGCATTGCC GCTGCGCGAG GCACGGGAAA CCTTCGAACG CGAATATCTG
ATAGCGCAGA TAAGCCGGTT TGGCGGCAAC ATTTCACGCA CAGCCGCCTT TATCGGCATG
GAGCGTTCGG CGCTCCATCG CAAGCTGAAA TCGCTCGGCG TCGCCGCCGC CAGCCGCCCC
GACGTGCCGG CATGA
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| Protein sequence | MASDILIVDD EADIRELVSG ILNDEGYDTR SAGDSDRALA AIEARRPGLV ILDIWLQGSK
LDGLEVLDVI RERHPDLPVI IISGHGNIET AVSAIKKGAY DFIEKPFKAD RLILVVRRAI
ETFRLRRENS ELRVRVGDDT TLIGFSPAMA QVRQTIDKVA PTNSRVLITG ASGAGKEVVA
RLLHARSRRA GHSFVAINAA NMAPERMEIE LFGTEESAAG PRKVGVFEQA HGGTLFLDEV
AEMPVETQSK ILRVLVDQTF ERVGGGSRVK VDVRVVSSSS HDLLEEIAKG RFREDLYHRL
NVVPIFVPPL ASRREDIPAL VEYFMELISK GTGLPARRVS EDAMAALQAH DWPGNVRQLR
NNIERLLILT SGDPTAVVTA DMLPSEVGAS AQMTVNGAGG EHIMALPLRE ARETFEREYL
IAQISRFGGN ISRTAAFIGM ERSALHRKLK SLGVAAASRP DVPA
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