| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3109 |
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| Symbol | |
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| ID | 5454230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3319905 |
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| End bp | 3321059 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878699 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001414373 |
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| Protein GI | 154253549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.235035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.377951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT TTATTTCCGC TACCGCATTC GCCCTTTCGC TCGCTCTGAC GGCAGTCGCC
CTGCCGCGCG GGGCTTTCGC CTTTGAAACG GCGGCCGAAT ACGCGGTTCT GATGGACTAT
GAATCGGGCA GCATTCTCTG GGGAAAAAAT GCCGATGAGC AAATGCATCC GGCGAGCATG
AGCAAGCTGA TGACGCTCGA CATGCTGTTC GGTGCAATCC GCGATGGCAG TGTTTCGCTC
GATGATGAAT TCAAGGTGAG CGAGAATGCT TGGCGCAAGG GCGGGGCGGC TTCCGGTTCT
TCGACCATGT TTGCCGATCT CAATACCGTT GTTCCTGTGC ATGCTATTTT GCGCGGCATC
ATCGTCCAAT CCGGCAACGA TGCTTGCATC GCAACTGCCG AAGCGCTCAG CGGTTCGGAA
TCTGCCTTTG CAGAGGCCTT GACGGAACGC GGCAAGGCAA TCGGTCTGAC GAACTCCAAC
TTTACCAACT CAACCGGTTG GCCCGACGAA GACCATTTGA TGACGGCGCA TGATCTGGCT
GTGCTTGCCC GGCACATCAT CATGGAATTT CCCGAGTTCT ACCCGATCTT CAAGGAAACC
GACTTCACCT GGAACGGCAT CAAGCAGGGC AACCGCAATC CGGCGCTCTA TCTGGACCCG
TCCGTGGACG GATTGAAAAC AGGACATACA GAAGCCTCCG GGTATGGTCT TGTCGCTTCC
GCCAAACGTG GCGACCAGCG CCTCATCCTC GTATTGAACG GTCTGCCGAG CGAAAGGGCG
CGAGCCGATG AGAGCGTGCG GCTGCTCGAT TGGGGCTTCC GTTCGTTCAA GCATTACAAG
CTCTTCACCG CCGGAACGCC GGTTGAGAAC GCGCCTGTAT GGCAGGGCAC CTATGGAGAA
GTGCCACTTG TGAGCCAGAC GGATATCGAC GTGATCCTTT CGACCGAGCA GCGCAGGAAC
ATGAAGGTGT CCGTACTGTA TGACACGCCC GTCGCTGCAC CCGTCGCGGC GGGACAGCGG
ATCGGCACCA TTCGGATCGA AGCACCCGAC ATGCCGGTGC GCGAATTTCC TCTCGTTGCG
GGCGGAGCCG TTGAACGGCA AGGGATTTTT GGCCGTGCGA TGGGTGCGTT GAAGCATATG
ATCCTTGGCG GCTGA
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| Protein sequence | MNRFISATAF ALSLALTAVA LPRGAFAFET AAEYAVLMDY ESGSILWGKN ADEQMHPASM
SKLMTLDMLF GAIRDGSVSL DDEFKVSENA WRKGGAASGS STMFADLNTV VPVHAILRGI
IVQSGNDACI ATAEALSGSE SAFAEALTER GKAIGLTNSN FTNSTGWPDE DHLMTAHDLA
VLARHIIMEF PEFYPIFKET DFTWNGIKQG NRNPALYLDP SVDGLKTGHT EASGYGLVAS
AKRGDQRLIL VLNGLPSERA RADESVRLLD WGFRSFKHYK LFTAGTPVEN APVWQGTYGE
VPLVSQTDID VILSTEQRRN MKVSVLYDTP VAAPVAAGQR IGTIRIEAPD MPVREFPLVA
GGAVERQGIF GRAMGALKHM ILGG
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