Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3105 |
Symbol | |
ID | 5455276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3315909 |
End bp | 3316814 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640878695 |
Product | hypothetical protein |
Protein accession | YP_001414369 |
Protein GI | 154253545 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.578331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG GTGGAAAGAT TCGCATCGGC ATATCCGGAT GGACTTATGC GCCATGGCGC GGGGCCTTCT ATCCGGAAGG TCTCGCGCAC AAGCGAGAGC TGAATTATGC AGCCGAGCGT TTCAGTTCGA TCGAGATCAA CGGCACTTTC TACAGGCTGC AGCGGCCCGA GAGCTTCACC CGCTGGGCTG AGAATACGCC CGATGATTTC GTTTTCGCCG TGAAGGCACC TCGATACATT ACGCATATGC GCCGGCTGAA GAATATCGAG AAGCCTGTGG CCAATTTTCT CGCGTCGGGA GTTCTGAAAC TTGGACCCAA GCTCGGTCCC ATTCTTTGGC AATTTCCAGC CAGAATGAAA TTCGACCCCG GCACCTTCGA AGCCTTTCTC GCCCTTCTGC CGCGTAACAC AGAGGATGCG GCCGCTCTGG CGCGGCACCA CGACCGGCGG TTAAAGGGAC GCAACTGGAC AAAAACCGAT GCCAAAAGAC CGTTGCGGCA CGCAGTGGAA GTGAGGAGCG ATAGCTTTTG CACGCCGGAG TTCATCAAGC TGTTGCGTCG CTACAAAGTG GCGTTGGTTT GTGCGGATAC CGTCGAGTGG CCTCGCCTGA TGGATATCAC GTCCGATTTT GTTTATTGCC GATTGCACGG ATCGGAAGAG CTGTATGCAA GCGGCTATGG CGACAAGGAC CTACGGAACT GGGCACGCAG GGTAAAGGCA TGGGCCCGCG GCAGCGAGCC GGCCGATGCT ACGCGCGTTG TCAAAGCCAG CAAGCCGCGG AAGACCGGGC GAGATGTCTT TGTCTATTTC GACAATGACA TGAAAGTCAG GGCTCCAGTC GACGCAGCAT CTCTGGCAAA TAGAGTCGGC ATCGCCCCAA AATCACGCCG CTCATTCAAA ACCTGA
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Protein sequence | MAKGGKIRIG ISGWTYAPWR GAFYPEGLAH KRELNYAAER FSSIEINGTF YRLQRPESFT RWAENTPDDF VFAVKAPRYI THMRRLKNIE KPVANFLASG VLKLGPKLGP ILWQFPARMK FDPGTFEAFL ALLPRNTEDA AALARHHDRR LKGRNWTKTD AKRPLRHAVE VRSDSFCTPE FIKLLRRYKV ALVCADTVEW PRLMDITSDF VYCRLHGSEE LYASGYGDKD LRNWARRVKA WARGSEPADA TRVVKASKPR KTGRDVFVYF DNDMKVRAPV DAASLANRVG IAPKSRRSFK T
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