Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3102 |
Symbol | |
ID | 5454176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3314045 |
End bp | 3314662 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640878691 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001414366 |
Protein GI | 154253542 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.480753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.323994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTGT ACAATTCGAT CGGGCCAAAT CCGCGTGTCG TGAAAATGTT CATGCACGAG AAGGGCATCG AACTTCCCCT TGCGGAAGTC GACCTGATGA AGGGCGAAAA TCGTCAGGAG CCCTATCTTG CAAAAAACCC GGCCGGCCAG CTGCCGGCAC TCGAGCTCGA CAATGGAATG ATCCTCGCCG AGATCACCGC CATTTGCGAA TATCTGGACG AGAAATTTCC GGGCGGGTCG CTGATCGGCA CGACGCCGGA AGAGCGTGCG GAAACCCGCA TGTGGACGCG CCGCGTCGAT CTCAATGTTT GCGAACCGAT GGCCAATGGC TTTCGCTTTT CGGAAGGCCT GCCGCTCTTC AAAGACCGGA TGCGCTGTCT GCCCGAGGCT GCGGCCGGCA TGAAAGCCAT CGCGCAGGAC AAGCTTGCAT GGCTCGACAA GCTGATGGCG GGCAAGGATT ACCTTGCGGG AAAGCGCATG ACGCTGGCGG ATATTCTGCT ATTTGGCTTT CTCGACTTTG GCGCTGCGGT CGGTCAGCCG ATCAACCCCG ACTTCAAGAA CATAACCGCC TGGTTCGATC GCATGAAGGG CAGGGCGTCT GCGGCGGCAA GCGCCTGA
|
Protein sequence | MKLYNSIGPN PRVVKMFMHE KGIELPLAEV DLMKGENRQE PYLAKNPAGQ LPALELDNGM ILAEITAICE YLDEKFPGGS LIGTTPEERA ETRMWTRRVD LNVCEPMANG FRFSEGLPLF KDRMRCLPEA AAGMKAIAQD KLAWLDKLMA GKDYLAGKRM TLADILLFGF LDFGAAVGQP INPDFKNITA WFDRMKGRAS AAASA
|
| |