| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3092 |
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| Symbol | |
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| ID | 5455475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3303024 |
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| End bp | 3304376 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878681 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001414356 |
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| Protein GI | 154253532 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.148936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC GATCCATAGG CATTGTACCC GCCGCAGCCA CGATAGCCGG TGTTCTCATC
ATCGGAGCGA CAGCGGCACA GGCAGCAGGC TTCGCCATTC GCGAACAATC ATCGGCTGCA
CAAGGCACAT CCTTCGCGGG CGTCTCCGCC GGCGGCGACA ATGTCAGCTC CATTTTCTAC
AATCCCGCCA CGTTGACGCT TTACGATGGC ATCAACATGT CCGGCCAGTT CTCATGGATC
ATCCCGGATG TGGAGTTCGG CGAATCCTCG GCCTCGACGA TAACGGGCGC GCCGATCACC
GGCGGCAATT CCGGCAATAT CGGTCCGCAG GCCTTGGTGC CGGCATTCTA TGCGTCATGG
CAGGTTTCGC CGGACTGGTT TCTCGGGCTG GCGGTCACGG CGCCATTCGG GCTGGTCACT
TCGGCCGACA GCGGCTGGAT CGGCCGCTAT CATGGGCTCG GCTCGCGGCT GCGCACCTAC
AACGTCGAGC CGATGGTGGC GTGGAAGGCG AATGAGTGGC TGTCCATCGG CGGCGGCGTG
CAGGTGCAAT ATTCGGATGC GCGGCTGACA AGCGCCATCG ACCTCGGAAC GATCGGCACA
TCGCAAGGCT TGCCCGGAGG CAACCCGGGC GATCCTTCGC AGGATGGCTT CGCGGCCGTC
GAAGGCGACG ACTGGTCCTA TGGTTATTCG CTTGGCGTCC TGCTCACGCC CCGGCCCGAT
ACGCGCATCG GCATCGGCTA TCGCTCCTCG ATGGATGTCG ATCTTGAGGG CGATGCCGAA
TTCGCTTTGA GCACCTACGG CGAACTGCTT TCGCTGCTTT CCGGCGCGTT GACGCCGACC
GGCGGCAGCG CCTCCATCAC GCTTCCCGAA ATGGTGACGC TCGGCGTGAA GCACGACATC
ACGCCGACAT GGACACTCGG CGCTGAAGTC GCATGGACGC GCTGGAGCCG CTTCGACGAG
CTTGTGGTCG AGTTCGACAA TCCGGCCCAG CCCGACGAGC TGACACGCGA GAACTGGGAA
GACAGCTACT TTCTCGCCCT TGGCGCGACC TACAAGGCGC GGGAAGATCT GCGGCTGCGC
GCGGGCGTGG CCTTCGATGA GGGCGTGGTG CCCTCCTCCG ATTTCCGCAC GCCGCGCATC
CCGGACGCCG ATCGCTACTG GTTTTCCGTT GGTGCGGGAT ATGACCTCAC GGAGAGCATG
ACGATCGACA CGGCCTATAC GCATATCTAT TCGCCCAAGG CCAATGTGAG GCTCGATGCG
ACCGATCCCG GCCATGAAGG GCGCGGCGAC CTGAACGGGA CATTCACGAG CTCTGCCGAC
ATCCTGACCG CGAGCCTGAG CATGAAGTTC TGA
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| Protein sequence | MTQRSIGIVP AAATIAGVLI IGATAAQAAG FAIREQSSAA QGTSFAGVSA GGDNVSSIFY
NPATLTLYDG INMSGQFSWI IPDVEFGESS ASTITGAPIT GGNSGNIGPQ ALVPAFYASW
QVSPDWFLGL AVTAPFGLVT SADSGWIGRY HGLGSRLRTY NVEPMVAWKA NEWLSIGGGV
QVQYSDARLT SAIDLGTIGT SQGLPGGNPG DPSQDGFAAV EGDDWSYGYS LGVLLTPRPD
TRIGIGYRSS MDVDLEGDAE FALSTYGELL SLLSGALTPT GGSASITLPE MVTLGVKHDI
TPTWTLGAEV AWTRWSRFDE LVVEFDNPAQ PDELTRENWE DSYFLALGAT YKAREDLRLR
AGVAFDEGVV PSSDFRTPRI PDADRYWFSV GAGYDLTESM TIDTAYTHIY SPKANVRLDA
TDPGHEGRGD LNGTFTSSAD ILTASLSMKF
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