| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3076 |
|---|
| Symbol | |
|---|
| ID | 5455581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3283892 |
|---|
| End bp | 3284905 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640878665 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_001414340 |
|---|
| Protein GI | 154253516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.422792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.609725 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAG AACGCAACCC CATGGCGGCA GCGCTGACGC AGACAGTGCT GCGCCATATC
AATGGAGCGA CGGGGGCGGA CGGCCTCAAA AGGCTGTCGG GCGGCGCAAG CCAGGAAACC
TGGTCGTTCG ACGCAACGAC AGAGGGACAA CCGATCCCGC TCATCCTCCG GCGCGCACCC
GGCGGTGAGC GCGCACCGAG CGCAACCGCG GTGCCGCTTG AAACGGAGGC CCAGCTGATC
GGCCTGGCGG GTGCCGCGGG TGTGCCCGTC CCGACGGTGC GCCATACGCT CAGCGCGGAA
GACGGCCTCG GCCATGGCTT CATCATGGAC CGGATAACAG GCGAAACGAT CGCCCGAAAA
ATACTGCGCG ACGATGAGTT CGCGGACGCC CGGCCGAAGC TCGCCCGGCA ATGCGGAGAA
ATCCTTGCCA GACTGCACAG CGTGGACAAG AAATCCCTCC CGCCACTGCG CACTTCGCCG
GCGCGGTCGG AAATCGATCA ATATCTTGGC GTCTACAAGA CGCATGGCCA CCCGCACCCG
GTTTTCGATC TCGCTCTGAG ATGGCTGAAG GAAAACGCCG CTCCCGAGAC AACGGCGCAT
ACGCTTGTCC ATGGCGACTT CCGGCACGGC AATCTGATGA TCGGGCCGGA CGGCATACGC
GCCGTTCTCG ACTGGGAACT CGCGCATATC GGCGACCCGA TGGAGGATCT CGGCTGGATA
TGCGTCAACT CATGGCGCTT CGGGAACATC GACCTGCCTG TGGGTGGCTT TGGTAGACGC
GAAGACATGT TCGAGGGGTA CGAAGCGGCG GGCGGCGCGA AGGTGGACCC CGCCCGCGTC
AAGTTCTGGG AAGTGCTCGG CACGCTCAAA TGGGGCATCA TGTGCACGAT CATGGTCACC
GCATTCAAGA GCGGCGCGGA CCGCTCCGTG GAGCGCGCCA CAATCGGCCG CCGTTCATCG
GAAACCGAAA TAGACCTGCT GCGTCTTCTG GCGCCGCGCG GGAAGGAGGC GTGA
|
|---|
| Protein sequence | MEAERNPMAA ALTQTVLRHI NGATGADGLK RLSGGASQET WSFDATTEGQ PIPLILRRAP
GGERAPSATA VPLETEAQLI GLAGAAGVPV PTVRHTLSAE DGLGHGFIMD RITGETIARK
ILRDDEFADA RPKLARQCGE ILARLHSVDK KSLPPLRTSP ARSEIDQYLG VYKTHGHPHP
VFDLALRWLK ENAAPETTAH TLVHGDFRHG NLMIGPDGIR AVLDWELAHI GDPMEDLGWI
CVNSWRFGNI DLPVGGFGRR EDMFEGYEAA GGAKVDPARV KFWEVLGTLK WGIMCTIMVT
AFKSGADRSV ERATIGRRSS ETEIDLLRLL APRGKEA
|
|---|
| |