Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3049 |
Symbol | |
ID | 5455794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3253018 |
End bp | 3255915 |
Gene Length | 2898 bp |
Protein Length | 965 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878637 |
Product | DNA gyrase, A subunit |
Protein accession | YP_001414313 |
Protein GI | 154253489 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGAGC CGCTTTCACA GGCCTTCGCG ACAGCGCCCT CAACGTCAGA AAAACACTTG TCCGATACGC AAGACAGCGA CATTCCGGGT GACGAGCCAG GCCCGGGCGA CGATACCGGC ATGGATAGTT TGAACGGTTC GGGCACGCCG CCCGGCGGTC CGGGCGGTCC TTCCGCCGGC GGTCCGCCGC CCGAGCGCGA CGTCGCTCCC ATCGCCATCG AAGATGAAAT GCGCAGTTCC TATCTCGATT ACGCGATGAG CGTGATCGTG AGCCGCGCGC TGCCCGATGC GCGGGACGGA TTGAAGCCCG TGCACCGCCG CATCCTCTTT TCGATGAACG AAAACGGCTA CGACTGGAAC AAGCCCTATC GCAAGTCGGC CCGCGTCGTC GGTGACGTGA TCGGTAAATA CCATCCGCAT GGCGACCAGT CGATTTACGA CGCGCTGGTG CGCATGGCGC AGGATTTCTC CATGCGCCTG CCGCTCTTGG ATGGGCAGGG CAATTTCGGT TCGGTGGACG GCGACCCGCC CGCCGCCATG CGATACACCG AAGTGCGCAT GGCGAAGACG GCCCATGCGC TGCTCAACGA CATCGACAAG AACACGATCG ACTTCAAGGA CAATTACGAC GGCACCGAAA GGGAGCCCGT CGTTCTCCCC GCCGAATTGC CGAACCTTCT CGTCAATGGC GCGAACGGTA TCGCCGTCGG CATGGCGACC AACATCCCGC CGCATAATCT CGGCGAGGTG ATCGACGCCT GTATCGCGCT GATCGACAAT CCTGACATCA CGATAGATGA ATTGATCGAG CATGTTCCCG CGCCCGATTT TCCGACCGGC GGCATCATGC TCGGCCGGCA GGGCGCGCGT CTTGCCTATC ACACGGGCAA GGGCTCGGTC GTGGTGCGCG GCCGCGTCGA GTTCGAGGAA GTGCGAAAAG ACCGTCAGGC GATCATCATT TCCGAAATTC CCTATCAGGT GAACAAGGCC TCGATGGTGG AAAAGATCGC CGACCTCGTG CGCGAGAAGC GCATCGAAGG CATCGCCGAT CTGCGCGACG AGTCCGACCG CAACGGTATG CGCGTGGTGG TGGAGCTTCG CCGCGATGCC GTGCCGGATG TGGTGCTGAA CCAGCTCTAC CGGTTCTCGC CGTTGCAGCA GAGCTTCGGC TGCAACATGC TCGCGCTCGA TCACGGGCGT CCCGAGCTGA TGAACCTGAA GCAGTTCCTC GAAATCTTCG TCGCTTTCCG CGAGGAAGTG ATTTCACGGC GAACCAAGTT CGAGCTCAAC AAGGCGCGCG ACCGCGCCCA TGTCCTTGTC GGCCTCGCCA TTGCCGTCGC CAATATCGAT GAGGTCATCA AGCTCATCCG CACCGCGCCA GACCCGGCAT CGGCCCGCGA AAGTCTGATG GCGCGCGACT GGCCGGCGCG GGACATTGCG CCGCTGATCG CGCTGATCGA CGATCCGCGC CACCAGTTGC GTGAAGACGG CACCATCCGC ATGTCGGAGG AGCAGGCCCG CGCCATTCTC GAACTCCGCC TGCAGCGCCT CACCGCGCTT GGCCGCGATG AAATCGGCGA CGAACTGAAG GGTCTGGGCG AGCGGATCGA GGATTATCTC TCGATCCTGC GTTCGCGTGC CCGCGTGCTC GACATCATGC GTACCGAGCT GACGGCGATC AAAGCCGAGT TCGCGACGCC GCGCCGCACC GAGATTGCCG AGTCCGAATC CGATTTCGAG GATGAAGACC TGATCCAGCG TGAGGACATG GTCGTCACGG TCAGCCATCA GGGCTATATC AAGCGCGTGC CGCTCTCGAC CTATCGCGCG CAGCGCCGCG GTGGCAAGGG CCGGTCCGGC ATGTCGACCA AGGACGAGGA TTTCGTCACC CGTCTCTTTG TCGCCAATAC GCATACGCCC ATGCTCTTCT TCTCGTCCAC GGGCATGGTC TACAAGCTCA AGGTCTGGCG TCTGCCGCAA TCGACGCCGC AAGCGCGCGG CAAGGCGATG ATCAATATCC TGCCGCTCGA CCACGGCGAA TACATCACCA CCGTCATGCC GATGCCGGAA GACGAAGCGA GCTGGGACAG CCTCCACGTT ATGTTCGCCA CCCGCAAGGG CAGCGTTCGC CGCAACAAGC TGTCGGACTT CGTGCAGATC AACCGCAACG GCAAGATCGC GATGAAGTTC GAAGGCGACG ATGCGGATGA CGCCATTGTC GGCGTGCAGA TCTGCACGGA GGAAGACGAC GTGCTGCTCA CCGCCGCGAA TGGCCGCTGC GTCCGCTTCC CCGTTACCGA GGTTCGCGTC TTCTCCAGCC GCAAATCAAC TGGCGTGCGC GGCATCCGTC TCGGCGATGA CGACAAGCTG ATCGCCATGA GCATCATGCG TCATGTCGAC GTCACGCCGG CGGAGGCGCG CGCTTACCTG AAGCAGGCCG CCGCCATGCG CCGTGCCGTT TCCGGCGAGG GCGAGGAGCC GGAAGCCGAA ATCGTCGAGG CGGAAGAGGG CGAAGAGGAA GCAGCCGAAG AGATGACGCT CTCGACCGAG CGTTATTCCG AGCTTGGCGC CCGCGAGCAG TTTGTGCTCA CCGTCAGCGA AAAGGGCTTC GGCAAGCGGT CCTCCTCCTA CGACTACCGG ACGTCGGGCC GCGGCGGCAA GGGCATCATC GCCATGGCCG TCACGCCGCG TAACGGCAAT CTCGTTGCCT CCTTCCCGGT CGATGTGCAG GACCAGATCA TGCTCGTCAC AGATGCCGGC CAGCTCATTC GCTGCCCGGT GGACGATGTA CGCGCCGCGG GACGCGCGAC GCAAGGCGTC ACGATTTTCC GTACCGCGCC GGATGAGCGC GTCGTCTCGG TCGAGCGGGT CGAGGAAACC GGCTCGGACG AGGAATAG
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Protein sequence | MREPLSQAFA TAPSTSEKHL SDTQDSDIPG DEPGPGDDTG MDSLNGSGTP PGGPGGPSAG GPPPERDVAP IAIEDEMRSS YLDYAMSVIV SRALPDARDG LKPVHRRILF SMNENGYDWN KPYRKSARVV GDVIGKYHPH GDQSIYDALV RMAQDFSMRL PLLDGQGNFG SVDGDPPAAM RYTEVRMAKT AHALLNDIDK NTIDFKDNYD GTEREPVVLP AELPNLLVNG ANGIAVGMAT NIPPHNLGEV IDACIALIDN PDITIDELIE HVPAPDFPTG GIMLGRQGAR LAYHTGKGSV VVRGRVEFEE VRKDRQAIII SEIPYQVNKA SMVEKIADLV REKRIEGIAD LRDESDRNGM RVVVELRRDA VPDVVLNQLY RFSPLQQSFG CNMLALDHGR PELMNLKQFL EIFVAFREEV ISRRTKFELN KARDRAHVLV GLAIAVANID EVIKLIRTAP DPASARESLM ARDWPARDIA PLIALIDDPR HQLREDGTIR MSEEQARAIL ELRLQRLTAL GRDEIGDELK GLGERIEDYL SILRSRARVL DIMRTELTAI KAEFATPRRT EIAESESDFE DEDLIQREDM VVTVSHQGYI KRVPLSTYRA QRRGGKGRSG MSTKDEDFVT RLFVANTHTP MLFFSSTGMV YKLKVWRLPQ STPQARGKAM INILPLDHGE YITTVMPMPE DEASWDSLHV MFATRKGSVR RNKLSDFVQI NRNGKIAMKF EGDDADDAIV GVQICTEEDD VLLTAANGRC VRFPVTEVRV FSSRKSTGVR GIRLGDDDKL IAMSIMRHVD VTPAEARAYL KQAAAMRRAV SGEGEEPEAE IVEAEEGEEE AAEEMTLSTE RYSELGAREQ FVLTVSEKGF GKRSSSYDYR TSGRGGKGII AMAVTPRNGN LVASFPVDVQ DQIMLVTDAG QLIRCPVDDV RAAGRATQGV TIFRTAPDER VVSVERVEET GSDEE
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