| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3029 |
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| Symbol | |
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| ID | 5456077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3229932 |
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| End bp | 3230750 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878617 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001414293 |
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| Protein GI | 154253469 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.244306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CTTCCGCCGA TCCGGCTCCC GAAGACGAGA TTGAGGCTTC GCGCGCGCCG
CTTCTCGATC ACCTGATCGA GCTTCGCTCC CGCCTTATCA AGATATTGCT GGCCTTCGCG
GTTGGCTTCG GCATCTGCTT CTTCTTCGCC AAGGACATCT ACAACATTCT GGTCGAGCCT
TATAACCGCA TCGTGGCGTC CGAGGGCGGG GCGCACATGA TCTATACGGC GCCGCAGGAA
TTCTTCATCA CCCAGCTCAA GCTTTCGATG TTCGGGGCGA TCTTCCTGGC CTTCCCCGTG
ATTGCCGCGC AGATCTACAT GTTCGTCGCG CCCGGCCTCT ACAAGCATGA GCGCGGCGCC
TTCGTTCCAT ATCTCATCGC GACCCCCATC CTGTTCCTGC TGGGTGCGAG CCTTGTCTAT
TACGGGGCGC TGCCGATTAC GCTCAACTTC TTCATGAGCA TGCAGCAGAT CGGCGAGGAC
GGAAAAGCCA CCATCGAATT GCTGCCGCGC GTCAGCGAGT ATCTGAACCT CGTCACGGCT
TTCATTCTGG CCTTCGGCAT TTGCTTCCAG TTGCCGGTCA TTCTGACCCT TCTGGCGCGG
GCCGGCATCG TGAACGCGGC GAAGCTGAGG CGGGGCCGGC GCTACGCGAT TGTGATCATT
TTCGCAGTCG CCGCCTTCCT GACCCCGCCT GATTTCTTCA GCCAACTGGC GCTCGGTATT
CCAACCCTGC TTCTCTACGA AATTTCGATT TTCAGCGTCG CCTGGACGGA GAAAAAGCGG
TCCGAGGCGG AAGAAACCGG CTCACCCGAC GAGGCGTGA
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| Protein sequence | MSAPSADPAP EDEIEASRAP LLDHLIELRS RLIKILLAFA VGFGICFFFA KDIYNILVEP
YNRIVASEGG AHMIYTAPQE FFITQLKLSM FGAIFLAFPV IAAQIYMFVA PGLYKHERGA
FVPYLIATPI LFLLGASLVY YGALPITLNF FMSMQQIGED GKATIELLPR VSEYLNLVTA
FILAFGICFQ LPVILTLLAR AGIVNAAKLR RGRRYAIVII FAVAAFLTPP DFFSQLALGI
PTLLLYEISI FSVAWTEKKR SEAEETGSPD EA
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