Gene Plav_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3002 
Symbol 
ID5455792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3202412 
End bp3203737 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content64% 
IMG OID640878589 
Producthypothetical protein 
Protein accessionYP_001414266 
Protein GI154253442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.449759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGCT GGCAAACCGG CGGCTCCGCC CCCGCGCGGC CCATGCGCGG CCCCTCGCTC 
GCAATCCGTA TCGGCGAAGC TTTCCTTTTC CTGGTTCTGT TGACCGGCTT CTACGTGAAG
TCGCAGCAGG GACAGGATCA GCCGACGCCT TACGACATCC TGATGGTCGG AACCGTCGGG
TTGTTCTTTC TTCTCGGGCT CAGGCTGCCG CGCGGTCTCG GCTGGCCGGC GGCGCTATGG
GGTCTCGTCG TTATCGGCTA TGGCATCGGC GCGATGGATG CGCTTTTTCT CGACCGCGTG
AAGCCGTCTC TGATGGTGAC GGTCTATCTG ATCGGTTCAT TCCTCTTCTT CGCTTCCTTC
GTCTATGCGG ATCCGGCGCG GCGTCTCACG CAGATGTTCT GGGCCTATAC GGCGGCGGCC
TGCGTCGCGG CATTTCTAGG TGTCGGCGGA TATTTCGGCG TCTTGCCGGG GTCGGAGAGC
TTCCTCGTCT TCGGCCGCGC CACCGGCACC TTCAACGATC CGAACGTCTT CGGCCCTTTC
CTTGTCGCGC CGGTCCTCTT TCTGGGATTG AAGCTGAGCG AGGCCCGTTC GCTCCGCGCG
CTCTGGATGG TGGCGCCGCT CGGCCTGCTG GTGCTCGGAC TGCTTCTCAG CTTCTCGCGC
GGCGCGTGGG GAAATCTGCT GCTTTCCGGC ATTCTCTTTT TCGTGCTGAC GCTCGCCACC
TCGCGGTCGC CGCGCCAGAC CTTCCGTCTC ATCGGCTTCG GTGCGCTCGC GGCCTTCATC
ATGGTGGCGG TTGTCGGCGT TGCACTGTCG AGCCCGAAAG TCTCGGCGCT CTTCAGCGAG
CGTGCGTCGC TCACGCAGAA TTACGACACC GATCCGCAGC ATGGCCGTTT CGAGAGCCAG
GCTCGCGCCT TCCAGATGGC GCTCGACCGG CCGTTCGGCA TCGGCCCGGC GCAATGGGCC
ATCCTCAACA ATCTGGACAC CCATAACGTC TATCTGCATG TCCTGGTGGC CGGCGGTTTC
CTGTCGGGCC TTGCCTTCAT CGCCTTCCTG CTCATGACGG CGGTCAGGGG CTGGCGGGCA
ATCTCGATGG AGAATCAGTT CCAGGGGCTG CTGATCGTCG TCTATGCGGC CTTCATCGGC
CATATCGCCG AGGCGATGAT CATCGACATC GACAGCTGGC GGCACTTCTA TCTGCTTCTG
GGGATGCTCT GGGGGGCTGT GCTCGCCGCC GAGAGGCGGG GCGTTGCCCG GCGGCAAATG
ACCGCCCCGC GCGCCGCGCC CGGAATTTCG GGTGCATCGG CGGCGGTTTC CGGCTTCCGC
GTCTAG
 
Protein sequence
MDGWQTGGSA PARPMRGPSL AIRIGEAFLF LVLLTGFYVK SQQGQDQPTP YDILMVGTVG 
LFFLLGLRLP RGLGWPAALW GLVVIGYGIG AMDALFLDRV KPSLMVTVYL IGSFLFFASF
VYADPARRLT QMFWAYTAAA CVAAFLGVGG YFGVLPGSES FLVFGRATGT FNDPNVFGPF
LVAPVLFLGL KLSEARSLRA LWMVAPLGLL VLGLLLSFSR GAWGNLLLSG ILFFVLTLAT
SRSPRQTFRL IGFGALAAFI MVAVVGVALS SPKVSALFSE RASLTQNYDT DPQHGRFESQ
ARAFQMALDR PFGIGPAQWA ILNNLDTHNV YLHVLVAGGF LSGLAFIAFL LMTAVRGWRA
ISMENQFQGL LIVVYAAFIG HIAEAMIIDI DSWRHFYLLL GMLWGAVLAA ERRGVARRQM
TAPRAAPGIS GASAAVSGFR V