Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3002 |
Symbol | |
ID | 5455792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3202412 |
End bp | 3203737 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878589 |
Product | hypothetical protein |
Protein accession | YP_001414266 |
Protein GI | 154253442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.449759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGGCT GGCAAACCGG CGGCTCCGCC CCCGCGCGGC CCATGCGCGG CCCCTCGCTC GCAATCCGTA TCGGCGAAGC TTTCCTTTTC CTGGTTCTGT TGACCGGCTT CTACGTGAAG TCGCAGCAGG GACAGGATCA GCCGACGCCT TACGACATCC TGATGGTCGG AACCGTCGGG TTGTTCTTTC TTCTCGGGCT CAGGCTGCCG CGCGGTCTCG GCTGGCCGGC GGCGCTATGG GGTCTCGTCG TTATCGGCTA TGGCATCGGC GCGATGGATG CGCTTTTTCT CGACCGCGTG AAGCCGTCTC TGATGGTGAC GGTCTATCTG ATCGGTTCAT TCCTCTTCTT CGCTTCCTTC GTCTATGCGG ATCCGGCGCG GCGTCTCACG CAGATGTTCT GGGCCTATAC GGCGGCGGCC TGCGTCGCGG CATTTCTAGG TGTCGGCGGA TATTTCGGCG TCTTGCCGGG GTCGGAGAGC TTCCTCGTCT TCGGCCGCGC CACCGGCACC TTCAACGATC CGAACGTCTT CGGCCCTTTC CTTGTCGCGC CGGTCCTCTT TCTGGGATTG AAGCTGAGCG AGGCCCGTTC GCTCCGCGCG CTCTGGATGG TGGCGCCGCT CGGCCTGCTG GTGCTCGGAC TGCTTCTCAG CTTCTCGCGC GGCGCGTGGG GAAATCTGCT GCTTTCCGGC ATTCTCTTTT TCGTGCTGAC GCTCGCCACC TCGCGGTCGC CGCGCCAGAC CTTCCGTCTC ATCGGCTTCG GTGCGCTCGC GGCCTTCATC ATGGTGGCGG TTGTCGGCGT TGCACTGTCG AGCCCGAAAG TCTCGGCGCT CTTCAGCGAG CGTGCGTCGC TCACGCAGAA TTACGACACC GATCCGCAGC ATGGCCGTTT CGAGAGCCAG GCTCGCGCCT TCCAGATGGC GCTCGACCGG CCGTTCGGCA TCGGCCCGGC GCAATGGGCC ATCCTCAACA ATCTGGACAC CCATAACGTC TATCTGCATG TCCTGGTGGC CGGCGGTTTC CTGTCGGGCC TTGCCTTCAT CGCCTTCCTG CTCATGACGG CGGTCAGGGG CTGGCGGGCA ATCTCGATGG AGAATCAGTT CCAGGGGCTG CTGATCGTCG TCTATGCGGC CTTCATCGGC CATATCGCCG AGGCGATGAT CATCGACATC GACAGCTGGC GGCACTTCTA TCTGCTTCTG GGGATGCTCT GGGGGGCTGT GCTCGCCGCC GAGAGGCGGG GCGTTGCCCG GCGGCAAATG ACCGCCCCGC GCGCCGCGCC CGGAATTTCG GGTGCATCGG CGGCGGTTTC CGGCTTCCGC GTCTAG
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Protein sequence | MDGWQTGGSA PARPMRGPSL AIRIGEAFLF LVLLTGFYVK SQQGQDQPTP YDILMVGTVG LFFLLGLRLP RGLGWPAALW GLVVIGYGIG AMDALFLDRV KPSLMVTVYL IGSFLFFASF VYADPARRLT QMFWAYTAAA CVAAFLGVGG YFGVLPGSES FLVFGRATGT FNDPNVFGPF LVAPVLFLGL KLSEARSLRA LWMVAPLGLL VLGLLLSFSR GAWGNLLLSG ILFFVLTLAT SRSPRQTFRL IGFGALAAFI MVAVVGVALS SPKVSALFSE RASLTQNYDT DPQHGRFESQ ARAFQMALDR PFGIGPAQWA ILNNLDTHNV YLHVLVAGGF LSGLAFIAFL LMTAVRGWRA ISMENQFQGL LIVVYAAFIG HIAEAMIIDI DSWRHFYLLL GMLWGAVLAA ERRGVARRQM TAPRAAPGIS GASAAVSGFR V
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