Gene Plav_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2962 
Symbol 
ID5456662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3161568 
End bp3162032 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID640878546 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001414226 
Protein GI154253402 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.652402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0357628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTG TCGCCATGAC GGTCAACGGC AAGCCCGCAA GCGCCGATAT TGAGGCGCGC 
ATGCTGCTTG TCCAGTTCAT CCGCGAGCAG CTCGGTCTCA CCGGCACCCA TGTCGGCTGC
GATACCAGCC AGTGCGGCGC CTGCGTCGTC CATGTCGATG GCCGTGCCGT GAAGTCCTGC
ACCATGCTTG CGACGCAGGC CGAAGGTGCC GAAATCCTCA CGATCGAAGG CCTCGCCCCG
GATGGCGACC TCCACCCGGT CCAGAAAGCC TTTCGCGAAC ATCATGGCCT GCAATGCGGC
TTCTGCACGC CCGGCATGAT CATGACGGCT GTCGACATGA TCCGCCGCAA GCCGGACCTC
GACGAGGAGA CCGTCCGCGA CGAACTCGAA GGCAACATTT GCCGCTGCAC CGGCTACCAT
AACATCGTGA AGGCGATACT CGCCGCCTCG CAGGAGATGC GCTGA
 
Protein sequence
MPVVAMTVNG KPASADIEAR MLLVQFIREQ LGLTGTHVGC DTSQCGACVV HVDGRAVKSC 
TMLATQAEGA EILTIEGLAP DGDLHPVQKA FREHHGLQCG FCTPGMIMTA VDMIRRKPDL
DEETVRDELE GNICRCTGYH NIVKAILAAS QEMR