| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2882 |
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| Symbol | |
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| ID | 5453444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3085588 |
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| End bp | 3086661 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878464 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001414146 |
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| Protein GI | 154253322 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000710816 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCC GTTCGTTCTT GACGGGCGCT GGCACAGCCG CCATCGCCGC CGCCGCCATG
CCCGCGCCTG CCGTGGCGCA GGGCAAGCGC CAGCTCAAGA TGGTCACCAC CTGGCCGAAG
AATTATCCCG GCCTCGGTGT CTCCGCCGAA CGCCTCGCCA CCCGCATCCG CGACATGACG
GACGGCCAGA TCGACATCAA GGTCTACGCC GCCGGTGAAC TCGTCCCCGC GCTCGAATCC
TTCGATACCG TTTCAAGCGG TGCCGCCGAC ATCTATCACG GCGCGGAATA TTACTGGCAG
GGCAAGTCCA AGGCGTTCAA CTTCTTCACT GCTGTTCCCT TCGGCATGAC GGCCGCCGAA
ATCAACGGCT GGATCTATCA TGGCGGCGGA CAGGAGCTCT GGGACGGCCT CTCCAAAGGC
TTCAACATCA AACCCCTCAT GACCGCCAAT ACCGGCGTGC AGCTCGCTGG CTGGTATCGC
AACGAGATCA AGTCGCTGGA CGACCTGAAG GGCCTCAAGA TCCGCATGCC CGGTCTCGGC
GGCGAGGTCA TGCGCCGCCT CGGCGCCGCC GCCGTCACGC TCGCCGGACC GGATATTTTC
CCCGCCCTCC AGAACGGCAC CATCGACGCC GCCGAATGGG TCGCGCCCTG GAACGACATG
GCCTTCGGTT TCTACCGCAT CGCCAAATTC TACTACTGGC CGGGCTTCCA CGAGCCGGGA
TCGAGCCTCG CCGCCGGCTT CAATCTCTCC GTCTGGGAGT CCTTCACCAA GCCGCAACAA
GCGATTGTCC GCGCCGCCTG CGCTGCCGAA AACGACTACA CCCTCGCCGA ATACACCCAT
CACAATGGCC GCGCCCTGAA GACGCTGGTC GATGAGCATG GCGTACAGAT GCGGAAATTC
CCCGACGATG TCCTCGCTGC TCTCAAGAAG GCGTCGCGCG AAGTCCTCGA AGACGCCGCC
AAAAGCGATG CCGCCACCGC GAAGATCTAT GAAAGCTTCC GCGAGGCGCT CGCCATCTCC
GAAGAGTGGA CGCGGATCGG CGATGAAGGT TTCGTGGAGG CCCGCCGCGG CTGA
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| Protein sequence | MKRRSFLTGA GTAAIAAAAM PAPAVAQGKR QLKMVTTWPK NYPGLGVSAE RLATRIRDMT
DGQIDIKVYA AGELVPALES FDTVSSGAAD IYHGAEYYWQ GKSKAFNFFT AVPFGMTAAE
INGWIYHGGG QELWDGLSKG FNIKPLMTAN TGVQLAGWYR NEIKSLDDLK GLKIRMPGLG
GEVMRRLGAA AVTLAGPDIF PALQNGTIDA AEWVAPWNDM AFGFYRIAKF YYWPGFHEPG
SSLAAGFNLS VWESFTKPQQ AIVRAACAAE NDYTLAEYTH HNGRALKTLV DEHGVQMRKF
PDDVLAALKK ASREVLEDAA KSDAATAKIY ESFREALAIS EEWTRIGDEG FVEARRG
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