| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2878 |
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| Symbol | |
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| ID | 5453439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3082582 |
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| End bp | 3082869 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640878460 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_001414142 |
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| Protein GI | 154253318 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00418139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000396722 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTC CGGCCGTCTA CATTGTCGCA AACAAGCGGA ACGGAACCAT CTATACCGGC
GTGACATCAC ATCTGGAGCG GCGCATCTAT GAGCATCGAG AAGGAGTGCT ATCCGGTTTC
TCAAAACGCT ATGGCTGCAA GATGCTCGTC TGGTACGAAA TGCTAGACGA GATGGAATAT
GCGATTGCAC GCGAGAAGCA GATCAAGGCC GGTACGAGGC AAAAGAAGAT CGATCTCATC
CAAAGCGGGA ATCCCGAATG GCGGGATTTG TATGAGGAGT TGATCTGA
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| Protein sequence | MKRPAVYIVA NKRNGTIYTG VTSHLERRIY EHREGVLSGF SKRYGCKMLV WYEMLDEMEY
AIAREKQIKA GTRQKKIDLI QSGNPEWRDL YEELI
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