| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2862 |
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| Symbol | |
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| ID | 5453919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3067978 |
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| End bp | 3068853 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878444 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001414126 |
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| Protein GI | 154253302 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.338154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.155363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAGG GATCGTATGT CGCGCTCATA ACGCCGTTCA AGAACGGCGC GGTGGATGAG
GCTGCATTCG TGAAACTTGT GGAATGGCAG ATCGAGCAGG GCACCCACGG GCTCGTCCCG
TGCGGGACGA CCGGCGAGTC GCCCACACTC AGCCATGACG AGCACAAGCG CGTCGTCGAA
TTGTGCGTCA AGACCGCGAA GGGGCGGGTG CCGGTCATTG CCGGGGCAGG CTCCAACAAT
ACGGTGGAAG CGATCGAACT GACCCGGTTT GCCAAGAAGG TCGGGGCGGA CGCCGTTCTG
AGCGTGACCG GTTACTACAA CAAGCCGTCC CAGGAAGGCA TTTTTGCCCA CTTCAAGGCA
GTGAATGATG CGGTCGATAT TCCCATCATT CTTTACAATA TCCCCGGGCG TACCATCGTT
GATATCACGC TCGAGACCAT GACGCGGCTT TTCGAGTTGA AGAACGTGGT CGGGGTGAAG
GACGCGACGG CCAATCTGGC GCGGGTCAGC CTGCAGCGGC AGGAAATGGG GGCGGAGTTC
TGCCAGTTGT CGGGTGAAGA CGCGACGGCG CTTGGCTTCA ACGCACATGG TGGCGTGGGC
TGCATTTCGG TGACGGCCAA TGTTGCGCCG GCGCTCTGCT CGGCGTTTCA GGAAGCGACG
CTCGACGGGG ACTACAGGAA GGCGCTGGAA ATCCAGGACC GGCTGATGCC GCTTCACAAC
GCGCTGTTCG TGGACCCGAA TCCGGCGCCC GTAAAGTATG CGGCAAACCT GCTGGGGCTC
TGCGCCAACG AATTGAGGCT GCCACTCGTC CCGGCAAGTG CCGCGGCTGA GCAGAAGGTT
CTGGGCGCCA TGCGCAGTGC CGGGCTTCTC AACTGA
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| Protein sequence | MFKGSYVALI TPFKNGAVDE AAFVKLVEWQ IEQGTHGLVP CGTTGESPTL SHDEHKRVVE
LCVKTAKGRV PVIAGAGSNN TVEAIELTRF AKKVGADAVL SVTGYYNKPS QEGIFAHFKA
VNDAVDIPII LYNIPGRTIV DITLETMTRL FELKNVVGVK DATANLARVS LQRQEMGAEF
CQLSGEDATA LGFNAHGGVG CISVTANVAP ALCSAFQEAT LDGDYRKALE IQDRLMPLHN
ALFVDPNPAP VKYAANLLGL CANELRLPLV PASAAAEQKV LGAMRSAGLL N
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