| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2844 |
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| Symbol | |
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| ID | 5454472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3048756 |
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| End bp | 3050273 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878425 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | YP_001414108 |
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| Protein GI | 154253284 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.053532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGA TGGTGAGCGA TTTCGAGCGC ACGATGCGCA AGCGCGAGGC GCGGCCGGAA
GACCTGATCA AAGGGCAGAC AGGCGACTGG GAGATCATTC TCGGGCTCGA AGTCCATGCC
CAGGTGACGT CGAACGCCAA GCTTTTCTCG GCTTCTTCCA CCAAGTTCGG CGCGGAACAG
AACACGCAGG TGAGCTTCGT GGACGCGGCG ATGCCGGGAA TGCTGCCGGT CATCAACCGC
TACTGCGTGG AACAGGCGGT GCGCACGGGG CTCGGCCTCA AGGCGCAGAT CAACCTGCGC
TCGGTGTTCG ACCGGAAGAA CTATTTCTAC CCGGACCTGC CGCAGGGCTA CCAGATCTCC
CAGTACAAGC ATCCGATCGT GGGCGAGGGC GAGGTCGTGC TCGACATGAA GGACGGGCGG
ACGGTGATCG TCGGCATTGA GCGGCTGCAT CTGGAACAGG ACGCGGGCAA GAGCCTGCAC
GACCAGCACC CCGCGATGAG CTTCGTCGAC CTCAATCGTT CGGGCGTTGC GCTGATGGAG
ATTGTCTCAA AGCCGGACAT GCGTTCCGCA GACGAAGCAA GGGCTTACGT GACGAAGCTG
AGAACAATCC TGCGCTATCT CGGTACCTGC GACGGCAACA TGGAAGAGGG AAGTCTGCGC
GCCGACGTTA ATGTTTCTGT GCGAAAGGTC GGCGCCCCGC TCGGCACGCG CTGCGAAATC
AAGAACGTGA ACTCGATCCG TTTCATCGGG CAGGCGATCG AATACGAAGC GCGGCGGCAG
ATAGAAATCC TCGAAGAGGG CGGCAAGATC GACCAGGAGA CGCGACTTTT CGATCCGAAG
ACGGGTGAAA CGCGCTCGAT GCGCTCCAAG GAAGAGGCGC ATGACTATCG CTACTTCCCC
GATCCCGATC TTCTGCCGCT GGAACTACTG CAGGACGATG TGGACGCCAT CCGGACGTCG
CTGCCGGAAC TGCCGGACGA AAAAAAGGCG CGACTGATCT CCGACTACGG GCTGTCGCCC
TACGACGCGA CCGTTCTGGT AAGCGAAGGC GCCCGCGCGG ACTTCTTCGA GGCGGTTGCA
AAAGGGCGCG ACGCGAAGCT CGCGGCGAAC TGGGTGACGG GCGATTTCTT CGGGGCGCTG
AACCGCGAAG GACACTCGAT CGAGGACACT CCGGTGACCG CGAAACAGCT CGGAGAGCTC
ATCGACCTCA TCTCCGACGG GACGATCTCG GGGCGAATCG CGAAGCAGGT TTTTGATTCG
ATGTACAAAA CGGGCCGTGA CCCGGCCAAA ATCGTCGAAG ATGAAGGCCT GCAGCAAGTC
ACGGATTTTG GAGAAATCGA GGCCGCAATC GACGCCGTCA TCGCGGCGAA CCCCGATAAA
GTCGAGCAAA CAAAAGTCAA GCCTCAACTT GCGGCGTGGT TTGTCGGCCA AATCATGAAA
TCCACGTCTG GCAAGGCTAA TCCGCGCGTC GTGAATGAAA TTCTTGCGCG AAAACTGGGG
CTATCGTCCG AAGGCTGA
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| Protein sequence | MTTMVSDFER TMRKREARPE DLIKGQTGDW EIILGLEVHA QVTSNAKLFS ASSTKFGAEQ
NTQVSFVDAA MPGMLPVINR YCVEQAVRTG LGLKAQINLR SVFDRKNYFY PDLPQGYQIS
QYKHPIVGEG EVVLDMKDGR TVIVGIERLH LEQDAGKSLH DQHPAMSFVD LNRSGVALME
IVSKPDMRSA DEARAYVTKL RTILRYLGTC DGNMEEGSLR ADVNVSVRKV GAPLGTRCEI
KNVNSIRFIG QAIEYEARRQ IEILEEGGKI DQETRLFDPK TGETRSMRSK EEAHDYRYFP
DPDLLPLELL QDDVDAIRTS LPELPDEKKA RLISDYGLSP YDATVLVSEG ARADFFEAVA
KGRDAKLAAN WVTGDFFGAL NREGHSIEDT PVTAKQLGEL IDLISDGTIS GRIAKQVFDS
MYKTGRDPAK IVEDEGLQQV TDFGEIEAAI DAVIAANPDK VEQTKVKPQL AAWFVGQIMK
STSGKANPRV VNEILARKLG LSSEG
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