| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2843 |
|---|
| Symbol | |
|---|
| ID | 5454258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3047281 |
|---|
| End bp | 3048759 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640878424 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, A subunit |
|---|
| Protein accession | YP_001414107 |
|---|
| Protein GI | 154253283 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.429835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TGACAAAACT GACGCTCGCC GGTGCGCGCG ACGCGCTGAA GAAGAAAGAG
ATCACCTCCA CGGAGCTGAC CGGCGCCTAT CTCAAGGAGA TGGAGGCGGC TGCGGCGCTC
AATGCCTATG TGACGGTGAC GGCCGACAAG GCGATGGAGA TGGCGAAGGC GTCCGACGCG
AAGCTCGCCA AGGGCGAGGG CGGAGCGCTG GAAGGGCTGC CGCTCGGCAT CAAGGATCTC
TATTGCACCA AGGACGTGCT GACGACAGCA TGCAGCCACA TTCTCGATGG CTTCAAGCCG
GCTTACGAGT CGACGGTAAC GAGCAATCTG TGGCGCGATG GGGCCGTCAT GCTCGGTAAG
CTCAACAATG ACGAGTTTGC CATGGGCTCG TCGAACGAGA CGAGCCATTA CGGCTCCGTC
GTCAATCCAT GGCGGCGCAA GGGATCGGAT GCGAAGCTGG TGCCCGGCGG CTCGTCAGGC
GGATCGTCGG CGGCGGTGGC GGCCAATCTC TGCCTCGCGG CGACGGCGAC GGATACGGGC
GGCTCGATCC GCCAGCCGGC GGCGTTCACG GGCACCGTGG GCCTGAAGCC GACCTATGGA
CGCTGCTCGC GCTGGGGGAT CGTGGCGTTC GCCTCGTCGC TCGACCAAGC GGGGCCGATC
GGCCGCGACG TGCGCGACAC GGCGATCATG CTGGGTTCCA TGGCCGGACA TGACGAGAAG
GACACGACGA GCGTCGACCG CGCGGTGCCG GACTATGAGG CGGTGCTCGG GCAGAGCATC
AAGGGCCTCA GCGTCGGCAT TCCGAAGGAA TACCGGGTGG ACGGCATGCC GGGCGAGATC
GACGAGCTCT GGTCGCGCGG CATCGAGTGG CTGAAGGCGG CGGGGGCGAC TGTGAAGGAA
GTGAGCCTGC CGCACACCAA ATACGCGCTG CCGACCTATT ACATCGTGGC GCCGGCGGAA
TGCTCCTCCA ACCTCGCGCG CTATGACGGC GTGCGCTACG GGCTGCGCGT GGATGGCCGC
GACATCACGG ACATGTATGA GAAGACGAGG GCGGCGGGCT TCGGCGCGGA AGTGCGGCGG
CGCGTGCTGA TGGGCACCTA TGTGCTGTCG GCGGGCTATT ACGATGCCTA TTACCTGAAG
GCGCAGAAGG TGCGGTCGCT GATCGCGCAG GACTTTGCGT CTGCGTTCTC CGAGGTGGAC
GTGCTGCTGA CGCCGACGGC GCCTTCGGCG GCCTTCGCCA TTGGCGAGAA GAGCGACGAT
CCGCTGTCTA TGTACCTGAA CGACGTCTTC ACGGTGCCGG TGAACCTTGC CGGGCTGCCG
GGGATTTCGG TTCCGGCCGG GCTGTCGGGC GAGGGGCTGC CGCTCGGATT GCAGCTGATC
GGACGGACAT TCGACGAAGA GACGCTGCTG AAGGCGGCCT ATGCAATCGA GCAGGCGGCG
GATTTCAAGG CGGCACCCGA AGCGTGGTGG AAAGCATGA
|
|---|
| Protein sequence | MSDLTKLTLA GARDALKKKE ITSTELTGAY LKEMEAAAAL NAYVTVTADK AMEMAKASDA
KLAKGEGGAL EGLPLGIKDL YCTKDVLTTA CSHILDGFKP AYESTVTSNL WRDGAVMLGK
LNNDEFAMGS SNETSHYGSV VNPWRRKGSD AKLVPGGSSG GSSAAVAANL CLAATATDTG
GSIRQPAAFT GTVGLKPTYG RCSRWGIVAF ASSLDQAGPI GRDVRDTAIM LGSMAGHDEK
DTTSVDRAVP DYEAVLGQSI KGLSVGIPKE YRVDGMPGEI DELWSRGIEW LKAAGATVKE
VSLPHTKYAL PTYYIVAPAE CSSNLARYDG VRYGLRVDGR DITDMYEKTR AAGFGAEVRR
RVLMGTYVLS AGYYDAYYLK AQKVRSLIAQ DFASAFSEVD VLLTPTAPSA AFAIGEKSDD
PLSMYLNDVF TVPVNLAGLP GISVPAGLSG EGLPLGLQLI GRTFDEETLL KAAYAIEQAA
DFKAAPEAWW KA
|
|---|
| |