Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2809 |
Symbol | |
ID | 5455102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3012985 |
End bp | 3014256 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878391 |
Product | DNA polymerase IV |
Protein accession | YP_001414074 |
Protein GI | 154253250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.436092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CCACCCCCCA AGGCTTCTGC CGCGACTGCT TCGCCTCTGT GCCGCCGGAA GCGACCCGCT GCCCTGCCTG CAAGCGCCCG CGCCTGAAAT TCCATCCCGA GCTTCACACC CTCACCATCG CGCACATGGA TTGCGACGCC TTCTACGCCG CCGTCGAAAA GCGCGACAAC CCGGAGCTGC GCGACAAGCC GCTCATCATC GGCGGCGGCA CGCGCGGCGT CGTCTCCACC TGCTGCTACA TCGCGCGAAT TCGCGGCGTC CGCTCCGCCA TGCCCATGTT CAAGGCGCTC GCCGCCTGCC CCGAAGCCGT CGTGATAAAG CCCGACATGA CGAAATATGC GCGCGTCGCC CGCGACGTCC GCGCCCTGAT GCGCGACCTG ACGCCGCTCG TCGAGCCCGT CTCCATTGAC GAGGCTTTTC TCGACCTCTC CGGCACCGAG CGCCTGCATC ACGCGAGCGC GGCGATCAGC ATGGCGCGCC TCGCCAAACG CATCGAGGAC GAAATCGGTA TCACCGTTTC CGTCGGCCTC AGCCACAACA AGTTCCTGGC GAAAATCGCC TCCGATCTCG ACAAGCCGCG CGGCTTCGCC ATCATCGGCC GCGAGGAAAC ATTGTCCTTC CTCGCCGAAA AACCCGTTTC CATGATCTGG GGCGTCGGCA AGGCGCTCGA AACCAAACTC GCCCGCGACG GCATCACGCG CATCGCCCAT CTCCAGCGTA TGGAGGAAAA CGATCTCATG GCGCGCTACG GCTCGATGGG CCGCCGCCTT TCGCGTCTCT CGCGCGGCCT CGATACGCGC GGCGTCGAAC CCGTCCATGA GGCAAAGAGC ATTTCGTCCG AAACCACCTT CATGCGCGAC ATCGCGGATG CAGCCGAGCT CGACCGCAAG CTCTGGCCGC TCTGCGAAAA AGTCTCCGCC CGCGCCAAGG CCGCCGGCCT TTCCGGTTCG ACCATCGTCC TGAAACTGAA GACCGCCGAC TTCAAGACCC GCACCCGCAA CCAGACGCTG CCGGATCCGA CTCAGCTCGC GGAAGTCATC TACCGCATTG CCGCGCCCAT GCTCGCGCGC GAGGCCACGG GGACAAGTTT TCGTCTTCTC GGGGTGGGGA TTTCCGGTCT CGCCGATGGC GACCTCGCCG ACCCGAACGA CCTGCTCGAC CCCGCCGCAA CACGCCGCGC CGCCGCCGAG CGCGCCATGG ACAAGCTGCG CGCAAAATTC GGGGATAAGT CCATCGTCAA GGGTCGCGGC CTGCGCCGGT GA
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Protein sequence | MTTTTPQGFC RDCFASVPPE ATRCPACKRP RLKFHPELHT LTIAHMDCDA FYAAVEKRDN PELRDKPLII GGGTRGVVST CCYIARIRGV RSAMPMFKAL AACPEAVVIK PDMTKYARVA RDVRALMRDL TPLVEPVSID EAFLDLSGTE RLHHASAAIS MARLAKRIED EIGITVSVGL SHNKFLAKIA SDLDKPRGFA IIGREETLSF LAEKPVSMIW GVGKALETKL ARDGITRIAH LQRMEENDLM ARYGSMGRRL SRLSRGLDTR GVEPVHEAKS ISSETTFMRD IADAAELDRK LWPLCEKVSA RAKAAGLSGS TIVLKLKTAD FKTRTRNQTL PDPTQLAEVI YRIAAPMLAR EATGTSFRLL GVGISGLADG DLADPNDLLD PAATRRAAAE RAMDKLRAKF GDKSIVKGRG LRR
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