| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2762 |
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| Symbol | |
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| ID | 5453665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2961039 |
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| End bp | 2962496 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878343 |
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| Product | protease Do |
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| Protein accession | YP_001414027 |
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| Protein GI | 154253203 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.280827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTGG AAATGTTGTC GGAGTCGTCT TACGCGCAAG CGGTCGTCAT GGCGCTTGCC
GGAATCGTCC TTGTCGCCGT GCTCGCCTTC TTTCCCTGGG CGGCGCGGGC GCAGGACAAG
GAAGTGCCTT CAAGCCGCGC GCAGGTGCAG CTCTCTTATG CACCCGTCGT GAAGCGCGTC
GCGCCCGCCG TGGTCAATGT CTATACGAAG CGTGTCGTGA AGGAGCAGGC GCGTTCCCCC
TTCCTCAACG ATCCCTTCTT CCAGCAATTC TTCGGCAACC GCTTCAGCTT CGGCATGCCG
CGCGAGCGCG TGCAGCAGTC GCTCGGTTCC GGCGTCATCG TCGACCCGTC GGGCCTCATC
GTCACCAACT ACCATGTCAT CAAGGACGGC CAGCAATTCA CCGTTGCGCT GTCGGACCGG
CGCGAATTCG AGGCCGAACT CGTTCTCTCC GACGAGCGCA CCGACCTTGC CGTGCTGCGG
ATCGACAATG GCAAGCAGAA GCTGCCGCAT CTGACCTTCA AAAATTCGGA TTCCGTGGAA
GTCGGCGATC TCGTGCTCGC GATCGGCAAT CCCTTCGGCG TCGGCCAGAC GGTCACGTCG
GGCATCGTCT CGGCCTTGGC GCGCACGCAT GTCGGCGTCT CCGATTACCA GTTCTTCATT
CAGACGGATG CCGCCATCAA TCCGGGTAAT TCCGGCGGCG CGCTCGTCAC GATGGATGGG
CGCCTCATCG GCATCAACAG CGCCATCTAT TCGCAGACAG GCGGCAGCAT CGGCATCGGC
TTCGCGATCC CCTCCAACAT GGTCGAGAGC GTTGTCGCCT CCGCGCGCGA TGGCGATCAT
GTCCGGCGTC CATGGTTCGG CGCATCGCTG CAGCCGGTCG ATGCCGAGCT CGCGCAGTCG
CTCGGGCTCG ATCGTCCGGG CGGCAGTCTC ATCCGCGACA TCTATCCCGG CGGTCCGGCG
GACAAGGCGG GGCTGAAAGT CGGCGACGTT ATCCGCGCCA TTGATGGCTT CGATGTCGAA
GAGCCTCAGG CGGTGCGCTA CCGTTTCGCT ACCAAGGGGC TCGGCGGTAA GGTGAATGTC
GGCTATAGCC GGGACGGCGC GCGGCGCGAA ACGCAGGTGG CGCTCATCGC GCCGCCGGAA
GACCCGCCTG CCGATGAAAC GAAAATCGCC GGCCGCAATC CCTTCGCCGG CGCCACCGCC
GCCAATCTCT CGCCCGCGAT AGCCGACAAG CTCGGTCTCG ACATTGTGGG AGAGCAGGGC
GTCGTCATCG TGAATGTCGA GCCCGGCTCC GCCGCCAATC AGGTCCAGTT CCAGCGCGGC
GATATCATCG TCGAAGTCGC GGCCACGAAA ATCGCCACGG TGCGCGACCT CGTCCGCATC
ACCGCCGCCA CACGTCCGCA ATGGGACTTC GCCATCAAAC GCGGCGACCG CGTCTTCTCC
GCGACGGTGG GCGGCTAA
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| Protein sequence | MVVEMLSESS YAQAVVMALA GIVLVAVLAF FPWAARAQDK EVPSSRAQVQ LSYAPVVKRV
APAVVNVYTK RVVKEQARSP FLNDPFFQQF FGNRFSFGMP RERVQQSLGS GVIVDPSGLI
VTNYHVIKDG QQFTVALSDR REFEAELVLS DERTDLAVLR IDNGKQKLPH LTFKNSDSVE
VGDLVLAIGN PFGVGQTVTS GIVSALARTH VGVSDYQFFI QTDAAINPGN SGGALVTMDG
RLIGINSAIY SQTGGSIGIG FAIPSNMVES VVASARDGDH VRRPWFGASL QPVDAELAQS
LGLDRPGGSL IRDIYPGGPA DKAGLKVGDV IRAIDGFDVE EPQAVRYRFA TKGLGGKVNV
GYSRDGARRE TQVALIAPPE DPPADETKIA GRNPFAGATA ANLSPAIADK LGLDIVGEQG
VVIVNVEPGS AANQVQFQRG DIIVEVAATK IATVRDLVRI TAATRPQWDF AIKRGDRVFS
ATVGG
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