Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2721 |
Symbol | |
ID | 5456371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2926879 |
End bp | 2927745 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878299 |
Product | RNA methyltransferase |
Protein accession | YP_001413986 |
Protein GI | 154253162 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0334114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.254549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATGAGC CCGAGAGCAG CAATATAAGC GCCCGCATGA GCCGACGCAA GCAACAGGGT AAATTCTCCA ATAGCAGCGC CACCTCGGGT AGCCCGCGGG GGCGCAACGG CCGTTCGCCA GCCGGCGGCA AGGGCGGTGG CGGCGCAAAT GATGCCTATC TCTATGGGTT TCATGCGGTT TTGGCCGCCT TGGCCAATCC GGCCCGCTTG GCCGAACGCC TTGTGCTGAC CCGCAACGCC GAGACCGAGC TGGCACGGCA AGGCGCCCGC CTTCCGGCCG ATCTTCCGGT GCGCCTGGAG ATTATGGAGA ACGAAGATAT AGCCGCGCTT TTGCCCGCTG GCGCCGTTCA TCAGGGAATC GCCCTTCGTG CCTCTCCCCT GCCAGATCTC GATGTGGTCG AAGCGTGCGA GGGTACAAAC CGCGTTGTGG TGCTGGATCA GGTCACCGAC CCGCATAATT TTGGAGCGAT TCTCCGTTCC GCCGCCGTCT TCGGGGCGGG CGCTCTGATA ACCACCGAGC GCAACAGCCC GTCCCTGGGC GGCGTGCTTG CCAAGGCCGC CTCAGGCGCT CTTGAGCTGG TCCGCGTCGC CCGCATCACA AACCTTGTTC GAGCGATCGA GGAACTCAAG GAACTGGGCT TCGAGGTGGT TGGCCTGGAT GGCGAAGGCG AAGCCTCCCT CCCCGATCTC AAACTCTCGC CACGTGTCGC TCTCGTGCTG GGTGCCGAGG GAGCTGGCTT GCGCCGGTTA ACGCGCGAGC ATTGCGATCT TCTGGCCCGT CTTCCGGCGG CAGGCGGCAT GAAGAGCCTC AATGTCTCCA ATGCCGCCGC CGTTGCTCTC TACGAGCTTT TTCGTCGGAA TCTCTAG
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Protein sequence | MHEPESSNIS ARMSRRKQQG KFSNSSATSG SPRGRNGRSP AGGKGGGGAN DAYLYGFHAV LAALANPARL AERLVLTRNA ETELARQGAR LPADLPVRLE IMENEDIAAL LPAGAVHQGI ALRASPLPDL DVVEACEGTN RVVVLDQVTD PHNFGAILRS AAVFGAGALI TTERNSPSLG GVLAKAASGA LELVRVARIT NLVRAIEELK ELGFEVVGLD GEGEASLPDL KLSPRVALVL GAEGAGLRRL TREHCDLLAR LPAAGGMKSL NVSNAAAVAL YELFRRNL
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