| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2698 |
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| Symbol | |
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| ID | 5456574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2902292 |
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| End bp | 2903506 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640878275 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001413963 |
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| Protein GI | 154253139 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.398036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC AGATCAGAGA CGCTTTCATT TGCGACGCCG TGCGGACGCC TATCGGGCGC
TATGCGGGGG CGCTGGCGCA GGTGCGCGCG GACGATCTCG GCGCGGTGCC GCTGATGGCG
CTGATGGAGC GGAACCCGGA TGTGAACTGG GAGCGGGTGG ACGATGTGAT CTTCGGCTGC
GCCAACCAGG CGGGCGAGGA CAACCGGAAC GTGGCGCGGA TGTCGGCGCT GCTGGCGGGG
CTGCCCGAAG GCGTGCCGGG ATCGACGGTG AACCGGCTCT GCGGCTCGGG CATGGATGCC
GTCGGCACGG CGGCGCGGGC AATCAAATCG GGCGAGGCAT CGCTGATGAT CGCCGGCGGC
GTGGAGAGCA TGTCGCGCGC GCCCTTCGTG ATGGGGAAGG CGACGAGCGC CTTTTCGCGC
GATGCGGAGA TTTACGACAC GACTATCGGC TGGCGCTTCG TGAACCCGCT GATGAAGCGG
CAATATGGCG TCGACTCCAT GCCGGAGACG GCGGAGAACG TGGCCGAGGA TTTCCAGATT
TCACGCGCCG ACCAGGATGC CTTTGCGTGG CGGAGCCAGC AGCGTGCCGG ACGGGCCATC
GAAGAGGGGC GTTTCGCGCA GGAGATCGTG CCGGTGACGA TTGCGAGCCG CAAAGGCGAG
ACGGTGGTGA GCGCGGACGA GCACCCGCGG CCAGAAACGA CGCTCGAGGC GCTCGGCAAG
CTCAAGGCGC CGTTCCGCGA AGGCGGCACG GTGACGGCGG GGAACGCATC GGGCGTGAAT
GACGGTGCCT GCGCGCTCAT CATTGCGTCG GCCGACGGAG CGGAGGCGAA CGGGCTTCGC
CCGCGGGCGC GGATCGTGGC GATGGCGACG GCGGGCGTTC CGCCGCGCAT CATGGGTATG
GGGCCGGCGC CAGCGACGCG CAAGGTGCTG GAAAAGACGG GGCTCAATAT CGGCGATATC
GACGTGATCG AACTCAACGA GGCTTTCGCC TCGCAGGGGC TTGCCGTGCT GCGCGATCTC
GGGCTGCCGG ACAATGCGGA TCACGTGAAC CCGAATGGCG GCGCCATCGC GCTCGGCCAT
CCGCTCGGCA TGAGCGGGGC GCGGCTGGTG ACGACGGCGA TGTACGAACT GGAGAAGCGC
GACGGGCGCT ATGCGCTGTG CACGATGTGC ATCGGCGTGG GGCAGGGCAT TGCGATGGTG
ATCGAGAGGG TTTGA
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| Protein sequence | MTHQIRDAFI CDAVRTPIGR YAGALAQVRA DDLGAVPLMA LMERNPDVNW ERVDDVIFGC
ANQAGEDNRN VARMSALLAG LPEGVPGSTV NRLCGSGMDA VGTAARAIKS GEASLMIAGG
VESMSRAPFV MGKATSAFSR DAEIYDTTIG WRFVNPLMKR QYGVDSMPET AENVAEDFQI
SRADQDAFAW RSQQRAGRAI EEGRFAQEIV PVTIASRKGE TVVSADEHPR PETTLEALGK
LKAPFREGGT VTAGNASGVN DGACALIIAS ADGAEANGLR PRARIVAMAT AGVPPRIMGM
GPAPATRKVL EKTGLNIGDI DVIELNEAFA SQGLAVLRDL GLPDNADHVN PNGGAIALGH
PLGMSGARLV TTAMYELEKR DGRYALCTMC IGVGQGIAMV IERV
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