Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2641 |
Symbol | |
ID | 5454172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2844923 |
End bp | 2845681 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878218 |
Product | transglutaminase family protein cysteine peptidase BTLCP |
Protein accession | YP_001413906 |
Protein GI | 154253082 |
COG category | [S] Function unknown |
COG ID | [COG3672] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.498867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGT TGCGTATCGT TGCGTTGGTG AGTGTCGCTG CTGGAATGGT CGGCTGTCAG GCGCCCGGCC AGGTCGGCAG CATCGGCCCC TCTTTTTTTG ATGAAACGGC GAGCGTGCAA CTGGTTGTCG CCTCGATGCC GGAGGGCCAG CGGGTCATGG CGCCCTACGG CTATATCGGC TTCTGCGTGC GCAATCCCGA TGAGTGCGGC GGTGGCACAA ACATGCCGCA GGATACGGCG CTGACGCCCG AAAGCTGGGC CGAGCTCAAC AAGGTCAACG ACTACGTCAA CCGCTCGATC CCCCAGGTCT CCGATTCCGC GCTTTATGAG CGCGCCGAAT GGTGGGCCTA CCCGACCGCG AGTGGCGGCG ATTGCGAAGA CCTCGCGCTG ATGAAGCGCA AGCTCCTGAT CGAGCGCGGC TGGGCGCCGG AAAACCTGCT GCTCTCCGTC GTGCGCGAAT GGAATGGCGA CGGCCACGCG GTTCTTGTCG TTAAAACCGA TCGCGGGGAA TTCGTTCTCG ACAACAAGAA CTGGGAAATC GTCGCCTGGT CCGATGCTCC CTATCAGTGG ATAAAGCGGC AGTCGCGCGA ACGGCCCTAT CTCTGGGTGA ACCTTGACGC CAGAACCTTC AGGAACGTGG CTGAGGCCGA GTTGCCGCCT CTCGGCGAAC CCGCGCCCTT CCTCGCCGCG ATCCAGAAAA ACAATCCCGC CATGCTTCGC CCCGGCGTGG CCGACGCGCC CACCGCCGCA TTCAATTGA
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Protein sequence | MSWLRIVALV SVAAGMVGCQ APGQVGSIGP SFFDETASVQ LVVASMPEGQ RVMAPYGYIG FCVRNPDECG GGTNMPQDTA LTPESWAELN KVNDYVNRSI PQVSDSALYE RAEWWAYPTA SGGDCEDLAL MKRKLLIERG WAPENLLLSV VREWNGDGHA VLVVKTDRGE FVLDNKNWEI VAWSDAPYQW IKRQSRERPY LWVNLDARTF RNVAEAELPP LGEPAPFLAA IQKNNPAMLR PGVADAPTAA FN
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