| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2625 |
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| Symbol | |
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| ID | 5453705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2831213 |
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| End bp | 2832484 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878202 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001413890 |
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| Protein GI | 154253066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.526109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.108457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTATC CCTCCTCCTA CTACGCTGCA ACAGCGAACG ACACGCCTCC CCTCGTCTCC
CTGAGCGGCG ACGAGACGGC GGATGTCTGC ATTGTTGGCG CGGGCTACAC CGGCCTCTCC
GCCGCGCTTC ACCTCGCGGA GCGCGGCTAT TCGGTGGTGG TGCTGGAGGC GGAACGTGTC
GGCTGGGGTG CATCGGGCCG CAATGGTGGT CAGCTCGGAG CGAGCCAGCG CAAGGATCAG
CGTTCGCTGG AAGAAGCCCT CGGCAAGGAA TGGGCGCGCC GGCTCTGGGA TCTCGGCCTC
GAAAGCAACG CGCTGGTGAA GGACCTGATC GCACGTCACG AGATAGACTG CGATCTGAAG
CCCGGTCTCC TTCAGGCGGG CTGGAAGAGA AGCTGCGCCA CATGGCTCCG GTCAGAAGTC
GACTACCTCA ATACGCATTA CGGCTATGAC GCGGTGCGCT ATGTGCCGCG CGCGGAAATG
CACGAGATGC TCGCGACGGA TCGCTATCAT GGCGGCCTTC TCGACAGCAA CGGCGCCCAT
CTTCACCCGC TGAATTACGC CCTCGGCCTC GCCCGCGCCG CCCGCGAAAA AGGCGTGCGT
ATCTATGAGG AATCGCGCGT CCTCGACATA ACGCATACCG ATCCCGCGGA TGTGAAAACG
GCCGTCGGCA AGGTCCGCGC GCGCCACGTC GTCCTCGCCT GCAATGCCTA TCTCGGCAAG
CTGGAGCCGC GTGTCGCCGG CTACATGATG CCGATCAACA ATTTCGTCGC GACCACCGAA
CCTCTCGGCA ATGAGGCGCG CCGGCTCATC CGCGACGATG TCTGCGTGCA GGACACGAAA
TTCGTCATCG ACTACTACCG GCTAACGGCG GATGGCCGTC TCCTTTTCGG CGGCGGCGAG
AGCTATTCGC CCTCGCTTCC CGCCGACCTC GCCGCCTTCG TGGAAAAACC CATGCTGCGC
GTCTTCCCGC AACTTGAAGG CAAGCGCATC GACTACGCAT GGTCGGGCGC CGTCGCCATC
ACGCTGAAGC GCATGCCGCA TTTCGGCCGC CTCGCGCCCA ATGTGGTATT CGCGCATGGC
TATTCCGGCC AGGGCATCAA CATCGCCACG CTGGGCGGCA AGCTGATCGC GGAAGCGATC
GCCGGACAGG CCGAACGCTT CGACTGGATG GCAAACCTCA AGACGCCGAA ATTCCCCGGC
GGCACATGGC TGCGCTATCC GGCGCTCGTC GCCGGCATGA TCTTCTATGC AATGAAGGAC
AGGTTGCCTT GA
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| Protein sequence | MAYPSSYYAA TANDTPPLVS LSGDETADVC IVGAGYTGLS AALHLAERGY SVVVLEAERV
GWGASGRNGG QLGASQRKDQ RSLEEALGKE WARRLWDLGL ESNALVKDLI ARHEIDCDLK
PGLLQAGWKR SCATWLRSEV DYLNTHYGYD AVRYVPRAEM HEMLATDRYH GGLLDSNGAH
LHPLNYALGL ARAAREKGVR IYEESRVLDI THTDPADVKT AVGKVRARHV VLACNAYLGK
LEPRVAGYMM PINNFVATTE PLGNEARRLI RDDVCVQDTK FVIDYYRLTA DGRLLFGGGE
SYSPSLPADL AAFVEKPMLR VFPQLEGKRI DYAWSGAVAI TLKRMPHFGR LAPNVVFAHG
YSGQGINIAT LGGKLIAEAI AGQAERFDWM ANLKTPKFPG GTWLRYPALV AGMIFYAMKD
RLP
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