Gene Plav_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2624 
Symbol 
ID5453616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2830378 
End bp2831205 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID640878201 
Productserine O-acetyltransferase 
Protein accessionYP_001413889 
Protein GI154253065 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.174291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.141631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC CGGTCGAGAA GAATCAGGGG CTGTCCGTGT GCGATCCCGT GTGGGAGCGC 
GTGCGCGCCG AGGCCGACGA AATGGCACTC GGCGAGCCGA TCCTTGCCAG CTTCCTCTAT
TCCACCATTC TCAATCATCG CAGTTTCAAC GATGCGGTCG CGTATCACCT GGCGCAGAAG
CTCGGCAATG CCGAAGTGCA TTCGATGCAG CTTCGCGAGT TGTTCGACGA GGCGCTGACG
GAGGCGCCCG ATATCGGCGA GGCGACGCGG GCGGATATCG TCGCCTATTT CGACCGTGAC
CCGGCCTGCC ACTCCTATAT CCAGCCGCTG CTTTATTTCA AAGGCTTCCA CGCGCTGCAG
GGCTACCGCG TGGCGCACTG GCTGTGGAGC AATGGCCGCC GGGCGATGGC GCTTTATCTG
CAGAGCCGCA TTTCCGAACT TTTCGCCGTG GATATTCATC CCGCCGCGAA GCTCGGGCGC
GGCATCTTCA TCGACCATGC GACCGGCATC GTGATCGGCG AGACGGCGGT GGTGGAAGAC
GATGTGTCGA TGCTGCATGG CGTGACGCTT GGCGGGACGG GCAAGGAAAC CGGCGACCGC
CATCCGAAGG TGCGGCGCGG TGTACTGATT TCCGTCGGCT CGAAGGTGCT CGGCAATATC
GAGGTGGGCG AGTTCAGCCG CATCGGGGCA GGCAGCGTGG TGCTTCACGA GGTGCCGCCG
CATTGCACGG CTGTCGGCGT GCCGGCCAAG ATCGTCGGCT GCGCGGGCTG CGACAAGCCG
AGCCATTCCA TGGATCAGAT GATCCGGGAA GAGGGCGACG GCATCTAA
 
Protein sequence
MSKPVEKNQG LSVCDPVWER VRAEADEMAL GEPILASFLY STILNHRSFN DAVAYHLAQK 
LGNAEVHSMQ LRELFDEALT EAPDIGEATR ADIVAYFDRD PACHSYIQPL LYFKGFHALQ
GYRVAHWLWS NGRRAMALYL QSRISELFAV DIHPAAKLGR GIFIDHATGI VIGETAVVED
DVSMLHGVTL GGTGKETGDR HPKVRRGVLI SVGSKVLGNI EVGEFSRIGA GSVVLHEVPP
HCTAVGVPAK IVGCAGCDKP SHSMDQMIRE EGDGI