Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2619 |
Symbol | |
ID | 5456266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2825107 |
End bp | 2825970 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878196 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001413884 |
Protein GI | 154253060 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.38962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0399907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGTC TCGACGGCAA GGTCGCCATC ATCACCGGCG GCACAAGCGG CATTGGCCGC GGCACGGTCG ATCTCTTCCT GAAGGAAGGC GCGAAAGTCG TCGCCGCCGA CTTGCAGGAT CACAAGGGCG AGGCGATGGA GCGCGAACTG GGAGAGAACT TCTCCTATTG CCGCGCCAAT GTCGCCCATG AAGACGAAGT GAAAAACCTC GTCGATCACA CGGTGAAGAA ATTCGGCAAG CTCGACATCC TCTTCAACAA TGCCGGCTAT GGCGGCGTCG GCGGCGAGCT TCAGGAAATC GACATGAACG GTTTCGATGA AACCGTCGGC GTCCTGCTGA AAGGTGTCGT GCTCGGCTAC AAATATGCCG TGCCGCACAT GAAGGCGCAG AAATCCGGCT CCATCATCTC AACGGCTTCC GTCGCCGGGT TGCAGGCAGG CTACGGTCCC TTGGTCTACT CCGCCTGCAA GGCCGCCGTG CATCACTTCT CGCGCTGCGC CGCCCTCGAA CTCGCGCCAC ATTTCGTGCG CTCGAACGCG ATCTGCCCCG GCGGCATCGC CACCTCGATC TTCGGCTCGG GCCTCGGTCT CGGCACGCAG GTGGCCGACC AGTTCGCCGA AGTCATGAAA ACGCATCTCG CGAAAATCCA GCCGACGCCC CGCTCCGGCC TGCCGGAAGA CATCGCGAAC GCCGCGCTCT TCCTCGCCAG CGACGAATCC ACCTTCGTCA ACGGCCAGAC CATCGCCGTC GACGGCGCGC TGACGGCGGG CCCCATGGCC ACGCTCGGCA AGCGCATCGA CTTCGAAAAG GTGATCGGCG ATTTCCTGTC GAGCCTGCCG GAAGACCAGC GCAAACCGGC CTGA
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Protein sequence | MGRLDGKVAI ITGGTSGIGR GTVDLFLKEG AKVVAADLQD HKGEAMEREL GENFSYCRAN VAHEDEVKNL VDHTVKKFGK LDILFNNAGY GGVGGELQEI DMNGFDETVG VLLKGVVLGY KYAVPHMKAQ KSGSIISTAS VAGLQAGYGP LVYSACKAAV HHFSRCAALE LAPHFVRSNA ICPGGIATSI FGSGLGLGTQ VADQFAEVMK THLAKIQPTP RSGLPEDIAN AALFLASDES TFVNGQTIAV DGALTAGPMA TLGKRIDFEK VIGDFLSSLP EDQRKPA
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