| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2560 |
|---|
| Symbol | flgA |
|---|
| ID | 5456011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2761591 |
|---|
| End bp | 2762571 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640878137 |
|---|
| Product | flagellar basal body P-ring biosynthesis protein FlgA |
|---|
| Protein accession | YP_001413826 |
|---|
| Protein GI | 154253002 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.443953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCGC GTATCCTTTC CCTCGCCGCC GCCCTTCTCG CTTTCGCCTC TGTCGCGCAG
GCGGCCGAAC TTCGCCCCGC CATCACCGTC GCAGGGCCGG TCGTCACGCT CGGCGATCTC
TTCGATGATG CGGGCAACGC CGCTTCCGTC GCTGTCGCCA ATGCGCCCGC GCCCGGCCTT
CGCGGCGAGA TCACCGTCTC GCGCATTTCG CTTGCCGCGC GCCGCAACGG TATCGAGTGG
CGCAACGATG CAGGCCTTAC CCATGTCGCG GTCGCGCGCA CCGGCGTTGC CGTCAGCGAC
GAGGACATTG CCGCTGCCGT CGCTGCCGCC GTTGAAACGC GCTCTTCGAG CCTTCCCTCC
GCCGCCCGGC TTCAGGTCGA CTTCACAAAC GGCATGGCAG GCATCCAGGT CGCCGAGGGC
GAGGAGCCGA CGGTCAGCGT CGAACAGATT TCCTTCAACA CGCGCAGCGG CGCTTTCACG
GCCATTGTCC GCGCACCCGC GCATGACGCG CTGAGCCCGC TCCGCCGCGT CACCGGCCGC
GCCTATCCCG TTCTCGACGT GCCGGTCCTC GTCCGCGACA TGCAGCCGGG AGACATCGTC
CGCCATCAGG ATATCGACTG GGTGCGCATG CCCGCGAACC GCGTCAGCCA GAATATGATC
GCCTCGATCG ATCATCTCGT CGGCATGTCG CCGCGCCACC CCGCCCGCGC GGGAGAGCCG
CTGCGTCTTT CCGACATGCA GCCGCCGCTC GTTGTCGAGA AAAATGCTCA GGTGGACATG
ACCTTCGTTT CCGGTGCGCT GACCTTGACC GCACGCGGGC GCGCGCTCCA GAGCGGCGCC
GTTGGGGACA TCGTCAATGT ACTGAACATC CGGTCCAACC GCACCGTCCA GGGCATCGTT
ACCGGGCCGA ACCTCATCCG CATCGACGCG CCCGGCGCCG CCCACGCGGC GAGCATTGCC
GGCACAGCAA ACAATTCGTA A
|
|---|
| Protein sequence | MLSRILSLAA ALLAFASVAQ AAELRPAITV AGPVVTLGDL FDDAGNAASV AVANAPAPGL
RGEITVSRIS LAARRNGIEW RNDAGLTHVA VARTGVAVSD EDIAAAVAAA VETRSSSLPS
AARLQVDFTN GMAGIQVAEG EEPTVSVEQI SFNTRSGAFT AIVRAPAHDA LSPLRRVTGR
AYPVLDVPVL VRDMQPGDIV RHQDIDWVRM PANRVSQNMI ASIDHLVGMS PRHPARAGEP
LRLSDMQPPL VVEKNAQVDM TFVSGALTLT ARGRALQSGA VGDIVNVLNI RSNRTVQGIV
TGPNLIRIDA PGAAHAASIA GTANNS
|
|---|
| |