| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2548 |
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| Symbol | |
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| ID | 5454197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2750682 |
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| End bp | 2751857 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878125 |
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| Product | HPP family protein? |
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| Protein accession | YP_001413814 |
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| Protein GI | 154252990 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.709048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGC CTCTCGCAAA GCTGCTTCGC CGCTCGGTAC GCGCTCTTGG TCCCGCCATT
CCCGGCGTTT CCCTGCGGGA GACCCTGCGC GCGGGCGGCG GCGCGATTGC GGGTCTCGGC
GTCGCGGGGC TCTTCGTCCT CTCGCCGAAA GTCGACCTCG AACTCGGTCT CTTTCTCATT
GCTCCGTTCG GTGCATCCTC GGTCCTCCTC TTCGCCGCGC CGAACAGTCC GCTCGCCCAG
CCCTGGTCGG CGATTGTCGG CAACACGCTT GCCGCGCTGG TCAGCGTCGC GGTGTGCCTG
AGCATTTCGG ATCCGCTTCT GCGCGTCGTT CTTGCGGTCA GCCTCTCCGT CGCCGCGATG
AGCGTCGCCC GCGCCATTCA TCCGCCGGCG GGCGCAGTTG CGATGACGGC AGCCCTGAGC
CCCGACATGG TTCGCGAACT GGGCTTCATG TTCGCTCTGA TGCCAGTCGC TCTCGGAACA
CTGATCCTCG TGCTCATCGC CGTCATCTAT GCCCATCTCA CGGGGCGCCG TTATCCGTTC
CGGCAGTTCG AGGAAGACAA CGCGCTCGGC ACCGCCGATC CGCCGCCGCT GCAGCGTCTT
GATCTCAGCG AGCAGGAACT GACCGGCATT CTTCAGCGCT ATCGTCAATC GCTGAACCTC
GGCGTCGAGG ATCTCGCTCG CCTCATCGGG GCCGCCGAGT TGCAGGCGGC CACGCATAGG
ACGGAGCCGC TCACCGCTGC CGCCATTATG TCGCGTGACC TCGTGACAGT CGCCTTCGAC
ACGCCGCTGT CGGAAGTCGC GGACCTCTTC CGGCAATACA GCTTCACATC CCTGCCTGTC
GTGGCTGAAG ACGGCCGCTT CCTCGGCATC ATCTATCAGA TCGACCTGAT CCGCCGCGCC
AGGGAAGATA CGCTCAGTCT CGACCGTGGC TTCGTCGCCG CCATGACGCG CCTCTTCGAC
ACGCGGAGTG CTGCTTACGT GAAAGCAGGC GAGGTCATGT CGGTCAGCAT CCCGAAGGCG
GCGCCCGACA CGCCGGCTGG CGCCTTGCTG CCGATGCTGG CGGAAAGCGG CTGCGACGCT
GTGCCCGTCC TCTCGGAGGA ATGCCTCGCC GGCATCGTCA CCCGCACGGA CCTTATCGCC
GCCCTCGCTC GGCGGACGCT TGGCTCCGCC GCCTAG
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| Protein sequence | MSSPLAKLLR RSVRALGPAI PGVSLRETLR AGGGAIAGLG VAGLFVLSPK VDLELGLFLI
APFGASSVLL FAAPNSPLAQ PWSAIVGNTL AALVSVAVCL SISDPLLRVV LAVSLSVAAM
SVARAIHPPA GAVAMTAALS PDMVRELGFM FALMPVALGT LILVLIAVIY AHLTGRRYPF
RQFEEDNALG TADPPPLQRL DLSEQELTGI LQRYRQSLNL GVEDLARLIG AAELQAATHR
TEPLTAAAIM SRDLVTVAFD TPLSEVADLF RQYSFTSLPV VAEDGRFLGI IYQIDLIRRA
REDTLSLDRG FVAAMTRLFD TRSAAYVKAG EVMSVSIPKA APDTPAGALL PMLAESGCDA
VPVLSEECLA GIVTRTDLIA ALARRTLGSA A
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