Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2500 |
Symbol | |
ID | 5455579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2701504 |
End bp | 2702613 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878077 |
Product | hypothetical protein |
Protein accession | YP_001413766 |
Protein GI | 154252942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.000111187 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCACCA AGGCAGACGA TTTTCCGATT CACCAGACGC CGGAGCCGAT CGCTTTCGCG GGCACCGACC GTAATTTCTA CGACCGCTTC TTTTTCAACG GTTATACGCG CGGTGGCGAT GTCTTCTTCG CTGCGGCGCT CGGCGTCTAT CCGCATCTCA ACATCATGGA TGGTGCCTTC AGCGTCATCG TCGATGGTGT GCAGCACAAT CTTCATGTCT CGCGCTTCCT CAACATGGAA CGCATGGATA CGCGCGTCGG GCCGCTCTCG GTCGATATCG TGGAGCCGCT TCAGGTGCTG CGTGTGCGCG TCGCCGATAA CGAGCATGGC ATCAAGGCGG ATGTAACTTT TCGTGGCCGT GCGCCCGCAT TGAAGGAGCC GCGTTTCACG CGCCGCAACG GTCCGCGCAC GCTGATGGAC CTCACCCGCA TGACGCAGAA CGGCACCTGG GAAGGCTGGA TCGAGGTCAA GGGCAAGCGC ATCGAGATCA AGCCGCAGGA TTATGTCGGC ACGCGCGACC GCTCCTGGGG CGTGCGCACC ATCGGTGCGC CCGATCCGCA GCCGCTGGTG CCGCCCATGC CGTTCCAGTT CTTCTGGATG TGGGCGCCGC TCAATTTCGA CGATCGCATC ACGCTCTTCC ATGTGAATGA CGACGAACAT GGCGAGCCCT GGAATCTCTC CGGCGTCATG TGTCCGCTCG GCGCGGATGC CGTGTCGCAG GAGATGGACC GCGTCAGCTA CGAAGTCGCT TACAAGTCGG GCTCGCGCCA CGCGAAGTCC TTCTCGATCT TCTTCGAGAC GCGCAAGGGC GAGAAGACGC GCATCGACCT CACGCCGAAA TTCCATTTCT ACATGCAGGG CATCGGCTAC GGGCATCCCG AGTGGAGTCA CGGCGCGCAC AAGGGCGACA ATGCGATGGG CTATGACGAA TACAAGCTCT CGGAAGTGAC GAGCTTTGCG CCGCCGAACC TGCATATTCA GGCTTTCTCG GACGCGGTGA TGACGCTGCC GGACGGGTCG ACGCGAAAGG GTTGCGGCAT TCTCGAGCAG CTCGTGATCG GGCCGCACGC GCCGTCGGGT TTCAAGGATG TTCTCGATCC GGCGAAGTAG
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Protein sequence | MLTKADDFPI HQTPEPIAFA GTDRNFYDRF FFNGYTRGGD VFFAAALGVY PHLNIMDGAF SVIVDGVQHN LHVSRFLNME RMDTRVGPLS VDIVEPLQVL RVRVADNEHG IKADVTFRGR APALKEPRFT RRNGPRTLMD LTRMTQNGTW EGWIEVKGKR IEIKPQDYVG TRDRSWGVRT IGAPDPQPLV PPMPFQFFWM WAPLNFDDRI TLFHVNDDEH GEPWNLSGVM CPLGADAVSQ EMDRVSYEVA YKSGSRHAKS FSIFFETRKG EKTRIDLTPK FHFYMQGIGY GHPEWSHGAH KGDNAMGYDE YKLSEVTSFA PPNLHIQAFS DAVMTLPDGS TRKGCGILEQ LVIGPHAPSG FKDVLDPAK
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