Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2499 |
Symbol | |
ID | 5453845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2700927 |
End bp | 2701313 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640878076 |
Product | hypothetical protein |
Protein accession | YP_001413765 |
Protein GI | 154252941 |
COG category | [S] Function unknown |
COG ID | [COG2363] Uncharacterized small membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.300029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000130725 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGGATGT GGCTTACTAT CGGTGCGCTG AGCGGGCTCA TCTCGGTCGC ACTCGGCGCT TTCGCCGCGC ATGGATTGCA GAACCGCGTC GGGCCGACAG AGCTTGCCGC CTTTGAAACA GGCGCGCGCT ACCAGATGTA TCACGCGCTG GCACTCATCG CCGTTGCCTG GGCATCGACG CAGGCAGGCG GCGGCTTCTC ATCGCTCTCA GTTTCGATTG CCGGCTGGGC GTTCCTTATC GGCTCGGTGC TTTTTTCCGG CTCGCTCTAC TATCTCGGCA TCACCGGCAG CCGCTCGCTG GTGCTGGTGA CACCTGTGGG CGGGGTCGCC TTCCTTGCCG GCTGGGTGGC GCTGGCGCTG GCCGGCTGGG CAATGAAAGC CCCCTGA
|
Protein sequence | MRMWLTIGAL SGLISVALGA FAAHGLQNRV GPTELAAFET GARYQMYHAL ALIAVAWAST QAGGGFSSLS VSIAGWAFLI GSVLFSGSLY YLGITGSRSL VLVTPVGGVA FLAGWVALAL AGWAMKAP
|
| |