Gene Plav_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2494 
Symbol 
ID5453733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2695798 
End bp2697156 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content64% 
IMG OID640878071 
Productglycosyl transferase group 1 
Protein accessionYP_001413760 
Protein GI154252936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.044708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0808495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG CGCTTGAGCG CGACACCGAA GACGCCGCGC TGGCAGCGCC TGCCGTCAAA 
ACCCTCCCGG AAAGCCCGCG CCTCGCCGCG GGCGCCGGCG ACAAGCCGCT GCGCATCCTG
CTGCCGAGCT ACCGCTCCAA TCCGACGACG GGCGGCCAGG GCGTTTACAT GCGCCATATC
GCCAAGGCGC TGGTCGAGCT CGGCCATCAG GTGGATGTGA TTTCCGGCCC GCCCTATCCC
GAACTCGACC CGCGCGTGAA GCTCATCAAG CTGCCCTCGC TCGACCTTTA TGCGAACCCG
CATCCGATCC GCTCGCTCAG GCCCTGGATG TTCGCCTACC CGATCGACCT GTTCGAATGG
TTCAGCCATG CGACGGGCGG CTTCTCCGAG CCCTACACCT TCTGCGAGCG CATGGCGCGC
TATGTCCGCG GCACGGTGGA CGAATACGAC GTCTGCCACG ACAACCAGAC GCTCGGCTGG
GGCCTGCTGA AGCTGCGCGA CATGGGCCTG CCGATCGTCG GCACCATCCA CCACCCCATC
ACGATGGACC GGCGCATCGA CATCGCGCAT GCGAAGACAC TGTCGCTGAA GCTGCTGAAA
AGGCGCTGGT ACTCGTTCCT CAATATGCAG ATCAAGGTGG CGCGCCAGCT CGACCCGCTG
ATCGTCGTCT CCGAAAGCAC GCGCCGCGAT GTTGTGCGGG AATTCGGCGT CGATCCATCG
AAGACGCGCC TTGTGCTGCA CGGCATCGAC CACCTGCAAT TCCGCCCGAT GCCGCATGTA
AAGCGGCGCG ACGACCTCAT CGTCGCCTGC GCCAGCGCCG ACGTGCCCTT GAAGGGCCTG
ATCTACCTCA TCCGCGCCTA TGCGGAATTG CTGAAGACGC GGCCGAACCT CAAGCTGAAA
GTGATCGGCC GTCTGCGCGA AGGCAACACC ACCGACGAGC TGCGCGCCTA TGGCATCATG
GACAAGGTGG AGTTCGTGAG CGGCGTGACC GACGAAGACA TCACCGAAAT CTACAACGAA
GCGACCATCG CCGTTTCGCC ATCGGTCTAT GAAGGCTTCG GCTTTCCCTG CGGCGAGGCA
ATGTCCTGCG GCACGCCGGT GATTGCGACC AATGGCGGTT CGCTGCCGGA AGTCGTCGGC
GATGCAGGCA TCGTCGTGCA GCATTCCAAT CCGCCGGCGC TTGCCGCCGC CATCGCTTCG
ATGCTCGACA ACCCGGAGAT GCGCGAGGCT TACGGCCGCG CCGGACGCGA GCGCATCCTC
GCCAAGTTCA AATGGGAACG TGCCGCGCGC GAATGCGCCG ACATTTACAG GCAGACAATC
AGAGATGCAG ACAATCGACT TGAACGTGCT CGGGCTTAG
 
Protein sequence
MSQALERDTE DAALAAPAVK TLPESPRLAA GAGDKPLRIL LPSYRSNPTT GGQGVYMRHI 
AKALVELGHQ VDVISGPPYP ELDPRVKLIK LPSLDLYANP HPIRSLRPWM FAYPIDLFEW
FSHATGGFSE PYTFCERMAR YVRGTVDEYD VCHDNQTLGW GLLKLRDMGL PIVGTIHHPI
TMDRRIDIAH AKTLSLKLLK RRWYSFLNMQ IKVARQLDPL IVVSESTRRD VVREFGVDPS
KTRLVLHGID HLQFRPMPHV KRRDDLIVAC ASADVPLKGL IYLIRAYAEL LKTRPNLKLK
VIGRLREGNT TDELRAYGIM DKVEFVSGVT DEDITEIYNE ATIAVSPSVY EGFGFPCGEA
MSCGTPVIAT NGGSLPEVVG DAGIVVQHSN PPALAAAIAS MLDNPEMREA YGRAGRERIL
AKFKWERAAR ECADIYRQTI RDADNRLERA RA