| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2475 |
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| Symbol | |
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| ID | 5454929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2676508 |
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| End bp | 2677266 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878051 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001413741 |
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| Protein GI | 154252917 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0100218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.326712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGAA CAAGTCGGCT ATTCGAGCTG CTCGGCGTGT TACGCGCACG CAGGATGCCT
GTTACAGCCC CCGATCTCGC GCGCGAACTT GGTGTCTCGC CGCGGAGTAT ATACCGCGAC
ATCGACACAT TGCGTTCGCT AGGGGCGCCT ATCGAAGGCC AGGCGGGTGT CGGCTATTCT
TTGAAAGAAG GCTTTTTTCT TCCGGATCTC GCATTTTCGC CCGATGAACT CGACGCGTTG
ACTCTCGGTC TGGGCTGGGT GCGGCAGCGA GCCGATCCTG CTCTGGCACG ATGCAGCGAA
AGCGCCCTGG CAAAAATATT TTCCGCGAAA AATAACGGCT CAATGAGCGC CCAATTACCT
GCTGTCGTAA CGGCGGCCTC GACGTCTGAG CCTGCGGTCC CTCCGCAGGC CGCATTGTTG
CGGGATGCGA TCCGCCGGCA ACGGAAAGTT GCGATCAGCT ATGAAGACGC GCAAGGCTCG
TTGTCGGATC GTGTCATCTG GCCGATCACC ATCGTCTATT TCGACGATGT CCGTGTGCTG
GCGGCCTGGT GCGAACGCAG ACATGCCTTC CGTCATTTCC GCATCGATCG TTTGCGTGTG
AAAACGATTT TGGAGGAACG CTACCCCGGG AGACGTCAAT CGATCGTGAC GCAGTGGCGG
CAGCAGGATC GCGACTGGCG TTCCATGCTG ACAATTTCTG ACACGCCGAA ACGCTACCAA
TCGGCGGGTG CCCTTACCGG TGCCATGTCA AAGGAATGA
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| Protein sequence | MSRTSRLFEL LGVLRARRMP VTAPDLAREL GVSPRSIYRD IDTLRSLGAP IEGQAGVGYS
LKEGFFLPDL AFSPDELDAL TLGLGWVRQR ADPALARCSE SALAKIFSAK NNGSMSAQLP
AVVTAASTSE PAVPPQAALL RDAIRRQRKV AISYEDAQGS LSDRVIWPIT IVYFDDVRVL
AAWCERRHAF RHFRIDRLRV KTILEERYPG RRQSIVTQWR QQDRDWRSML TISDTPKRYQ
SAGALTGAMS KE
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