| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2459 |
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| Symbol | |
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| ID | 5453813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2662116 |
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| End bp | 2662988 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878035 |
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| Product | HflC protein |
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| Protein accession | YP_001413725 |
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| Protein GI | 154252901 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.118766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT CTGTCGCCAT CGGCGCAGGC GTCGTCGCTC TTCTTGTGGC AATCGTCGCC
TATCTTTCGG CCTTTACGGT CGGCATGACG CAGCAGGCCA TCGTGCTGCA GTTCGGCGAT
CCGCGCGCGG TCGTCACCGA GCCGGGCCTT CACTGGAAGC TGCCTATCGT CCAGAACGTC
GTCTATATCG ACAAGCGGAT CCTCAGCCTC AATGTGCCGC CCGAGGAAAT CATCGCGAAG
GACCGCAAGC GCCTCGTGGT CGATGCCTTT GCCCGCTACC GCATCGTCGA CTCGCTGCGC
TTCTATCAAT CGGTCGGCGA TCCGCGCAAT TCGACCAACC GGTTGCAGCC GAACTTCGTG
TCGTCGCTCC GCAACGTGCT CGGCGATCAT ACGCTCGAGG AACTTGTCCG GGATAATCGC
GCCGGCCTGA TGAAACGTAT TCAGACGGCG TTCAACGGCG CCGCCCAGCA GTTCGGCATC
GAGGTGGTGG ATGTCCGCAT CCGCCGCGCC GACCTGCCGG AGCAGAACAG CCAGGCCATT
TTCCAGCGGA TGCAGACGGA GCGCGAACGC GAAGCCGCCG AAATCCGCGC GCAAGGTAAT
GAAGAAGGCC AGCGCATCCG CAGCCGCGCC GACCGCGAAG TCACTGTTAT CGTCGCCGAG
GCCGAGCGCG ATGCGCAGAT CGTCCGAGGC GAAGGCGATG CAACGCGCAA CAGCATCTAT
GCCGAAGCCT ATTCGGCGGA CCCGGAGTTC TTCGCCTTCT ACCGGTCGAT GGAAGCCTAT
AGAGAGGGCC TCGCGGGCGA CAACACGACG ATGATCGTGA CACCGGACAG CGAGTTCTTC
CGCTATTTCG GTAATGAGAG CGGTCGTCGC TGA
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| Protein sequence | MNRSVAIGAG VVALLVAIVA YLSAFTVGMT QQAIVLQFGD PRAVVTEPGL HWKLPIVQNV
VYIDKRILSL NVPPEEIIAK DRKRLVVDAF ARYRIVDSLR FYQSVGDPRN STNRLQPNFV
SSLRNVLGDH TLEELVRDNR AGLMKRIQTA FNGAAQQFGI EVVDVRIRRA DLPEQNSQAI
FQRMQTERER EAAEIRAQGN EEGQRIRSRA DREVTVIVAE AERDAQIVRG EGDATRNSIY
AEAYSADPEF FAFYRSMEAY REGLAGDNTT MIVTPDSEFF RYFGNESGRR
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