| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2436 |
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| Symbol | |
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| ID | 5453972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2635293 |
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| End bp | 2637629 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878012 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001413702 |
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| Protein GI | 154252878 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0016628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.650689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTG ACCCCTTCGA TCTCGGGAAC ATCCCCGAGG AAACGACTGC CCGCTCCACA
AGCCAGCAGG CCATGGCGGG CATGCGCGCG CCCTATCTGG AAGGCTTGAA CGCGGAGCAG
CGCGAGGCTG TGGAGGCGCT GGACGGCCCT GTGCTGGTGC TGGCGGGCGC GGGCACCGGC
AAGACGCGCG TGCTGACGAC GCGGCTGGCG CATCTGCTGG CGACGCGGAA GGCCTGGCCG
GGGCAGATAT TGGCGGTGAC TTTCACCAAC AAGGCGGCGC GCGAAATGCG CGACCGGATC
GGCGCGCTGA TCGGCGGCGT GGTGGAAGGC ATGCAATGGC TCGGCACCTT CCATGCGCTG
GGCGCGAAGA TATTGCGGCG GCATGCGGAA CTGGCGGGGC TGCGCTCCGA CTTCACGATA
TTGGATGCCG ACGACCAGAT GCGGCTGATG AAGCAGATCA TCGTGGCCGA AGGCATCGAC
GAGAAGCGCT GGCCGGCGCG CCAGCTCGCC TCGCATATCG ACGGCTGGAA GAACCGCGGG
CTGACGCCGG ACAAGGTGCC CGCCGGCGAA GCGCATGCCT TCGCCAACGG CAAGGGCGGC
GAACTCTATG CCGCCTATCA GGCGCGGCTG AAAGTTTTGA ACGCGGCGGA TTTCGGCGAC
CTGCTGCTGG AAGTGCTGCG CATCTTCCAG GAGCACCCGG AAGTGCTGGC CGACTATCAG
GACCGCTTCA AATACATGCT GGTGGACGAG TATCAGGACA CGAACGTCGC GCAATATCTG
TGGCTGCGGC TGCTGGCGCA GAAGCACAAG AATATCTGCT GCGTCGGCGA CGACGACCAG
TCGATCTATG GCTGGCGCGG CGCGGAGGTG GACAACATTC TCCGCTTCGA AAAGGACTTC
TCCGGCGCCA AGGTGGTGCG CCTCGAACGC AACTACCGTT CCACCGCGAA TATTTTGGGC
GCGGCCTCGG GCCTGATCGC CGCGAACGAG CAGCGGCTCG GCAAGACGCT GTGGACCGAA
GCCAACGACA ATGAAGGCGA CCCGATCAAG ATCGCCTCCT ATTGGGATGG CGAGGAGGAA
GCGCGCGCCA TTGCCGAGGA GGTGGAGCAG CTGCAGCGCA ACGCCCATCT GCTGCGGGAC
ATGGCGATAC TCGTCCGCGC CTCGTTCCAG ATGCGCGAAT TCGAAGACCG CTTCATCAAT
CTCGGCATCC CCTACCGCGT CGTCGGCGGC CCGCGCTTCT ATGAGCGCGC CGAAATCCGC
GATGCCAACG CCTATCTGCG CCTTGTCGCG CAGCCGGATG ACGACCTTGC CTTTGAGCGG
ATCGTGAACA AGCCACGGCG CGGGCTCGGC GATGTTGCCG TGCAGACGAT CCACCGGCTG
GCGCGCGCGG AGAACACGAC GCTTTTCCGC GCCTCGAAAA TGCTGGCCGC GAGCGAAGAA
CTGAAGCCCG CGGCGCGGCG GGCGCTGGCC TCCTTCATCG AGCAGGTGGA CCGCTGGCGC
GCGCTGGTGC CCGGCATGCC GCACACGGAA CTGGCGGAAA TCATCCTCGA TGAATCCGGC
TATACCGAGA TGTGGCAGAA CGACAAATCG GCGGACGCAC CCGGCAAGCT CGAAAACCTG
AAGGAACTCG TGCGCTCCAT GGAGTTTCAC GAGACGCTGG CCGGCTATCT CGAACACATC
TCGCTGGTGA TGGAGATGGA ACAGAGCGAC ACCGCCGACA AGATCAACCT GATGACGCTG
CACAGCGCCA AGGGGCTCGA ATTCGAGACC GTGTTTCTGC CCGGCTGGGA AGAGGGATTG
TTTCCGCATC AGCGCGCGCT GGACGAAAGC GGCCTTGCCG GGCTCGAAGA GGAACGCCGC
CTCGCCTATG TCGGCATCAC GCGGGCGAAA CAGCGCGCCT ATATTTCTTT TGCCGCCAAC
CGGCGCATCC ATGCGCTGTG GCAAAGCTCC ATCCCGTCGC GCTTCGTGGA CGAACTGCCG
AAACATCATG TGCAGGTGAC GGAAAGCGCG ATGGCGGGCG CGAGCTACCA GAATTACGGC
CAGAGCCGCT TCGCGCAGGA CTTCGCGCAG AACAGCAATT ATTCGAGCCC CGGCTGGCGC
CGCGCCCAGG CGAATACCGA AATGACCGCG CGGACGAGGC CGCCCGCCTA TGAGGTCCAT
GCCGATCTCG TCGCGACAAG CGACCCCGCC GCCGAAAGCT ACGGCAAGGG CGAACGCGTC
TTCCACCAGA AATTCGGCTA TGGCCATGTG ACGGAAATCG ACGGCAACAA GCTGACGGTC
GATTTCGACA AGGCGGGGCG GAAGAAGGTG ATCGACAGTT TTCTGGAGCG GGCGTGA
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| Protein sequence | MTSDPFDLGN IPEETTARST SQQAMAGMRA PYLEGLNAEQ REAVEALDGP VLVLAGAGTG
KTRVLTTRLA HLLATRKAWP GQILAVTFTN KAAREMRDRI GALIGGVVEG MQWLGTFHAL
GAKILRRHAE LAGLRSDFTI LDADDQMRLM KQIIVAEGID EKRWPARQLA SHIDGWKNRG
LTPDKVPAGE AHAFANGKGG ELYAAYQARL KVLNAADFGD LLLEVLRIFQ EHPEVLADYQ
DRFKYMLVDE YQDTNVAQYL WLRLLAQKHK NICCVGDDDQ SIYGWRGAEV DNILRFEKDF
SGAKVVRLER NYRSTANILG AASGLIAANE QRLGKTLWTE ANDNEGDPIK IASYWDGEEE
ARAIAEEVEQ LQRNAHLLRD MAILVRASFQ MREFEDRFIN LGIPYRVVGG PRFYERAEIR
DANAYLRLVA QPDDDLAFER IVNKPRRGLG DVAVQTIHRL ARAENTTLFR ASKMLAASEE
LKPAARRALA SFIEQVDRWR ALVPGMPHTE LAEIILDESG YTEMWQNDKS ADAPGKLENL
KELVRSMEFH ETLAGYLEHI SLVMEMEQSD TADKINLMTL HSAKGLEFET VFLPGWEEGL
FPHQRALDES GLAGLEEERR LAYVGITRAK QRAYISFAAN RRIHALWQSS IPSRFVDELP
KHHVQVTESA MAGASYQNYG QSRFAQDFAQ NSNYSSPGWR RAQANTEMTA RTRPPAYEVH
ADLVATSDPA AESYGKGERV FHQKFGYGHV TEIDGNKLTV DFDKAGRKKV IDSFLERA
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