Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2418 |
Symbol | |
ID | 5454664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2610394 |
End bp | 2611482 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877994 |
Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
Protein accession | YP_001413684 |
Protein GI | 154252860 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0289856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACG ATCTTCTCGG CGGCATGGCG GGCGACATTC AGGCACTCAA TGTCTTTCGC TACATCACCT TCCGCACCGG CGGCGCGACG GTGACGGCGC TGCTCATCAG CTTCCTGTTC GGGCCGCGCA TCATCGCTCT GCTGAAGGCC AAGCAGCGGC GCGGCCAGCC GATCCGCGAG GACGGGCCGC AGACCCATAT CATCCAGAAG CAGGGCACGC CGACGATGGG CGGCTTTCTC ATTCTCGTCG GGCTCGTTCC CTCGGTGCTG CTGTGGGCGG ACTGGAGCAA CCGCTATGTC TGGATCGTTC TCTTCGTGAC GCTCGGCTTC GGCGCGGTGG GTTTTGCAGA CGACTATCTG AAGGTTTCGA AGATTTCGCC GAAAGGCGTG CCTGGCCGCG TGAAGCTCTT TTTCGAATTC GTGATTGCGC TGATCGCGAT GTGGGCGCTG GTGCTTGTGT CGAGCGAGCC GCTGCAGACG GCGCTGACGG TGCCGTTCTT CAAAACGCTG TTGATCGAGC TTGGCGGATT TTTCTTTCTC TTCGGCGCGC TGGTGATCGT CGGATCGTCC AATGCGGTGA ACCTAACCGA CGGGCTCGAC GGGCTTGCCA TCGTGCCGGT GATGATCGCG GCGGCGTCTC TCGGGCTTAT CGTCTATCTC GTCGGCAATG CGGTGTTCGC GGATTACCTG CAGATCCATT TCGTGCCGGG GACGGGCGAG CTTGCGGTCT TCTGCGGGGC GCTGATCGGG GCGGGGCTCG GTTTCCTCTG GTACAACGCG CCGCCCGCCA TGGTGTTCAT GGGCGACACG GGCTCGCTTG CGCTTGGCGG CGCGCTCGGC GCGATTGCGG TGGCGGCGAA GCACGAGCTG GTACTGGCAA TCATCGGCGG GCTTTTCGTG CTCGAAGCGG TGTCGGTCAT CGTGCAGGTG GCATCGTTCA AGCTAACCGG CAAGCGCGTC TTCCGGATGG CGCCGCTGCA TCATCATTTC GAACAGAAGG GCTGGGCGGA ACCGACCGTC GTCGTGCGCT TCTGGATCAT CTCCGTCGTG CTCGCCATGG CGGGCCTCGC CACATTGAAG TTGAGGTGA
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Protein sequence | MLYDLLGGMA GDIQALNVFR YITFRTGGAT VTALLISFLF GPRIIALLKA KQRRGQPIRE DGPQTHIIQK QGTPTMGGFL ILVGLVPSVL LWADWSNRYV WIVLFVTLGF GAVGFADDYL KVSKISPKGV PGRVKLFFEF VIALIAMWAL VLVSSEPLQT ALTVPFFKTL LIELGGFFFL FGALVIVGSS NAVNLTDGLD GLAIVPVMIA AASLGLIVYL VGNAVFADYL QIHFVPGTGE LAVFCGALIG AGLGFLWYNA PPAMVFMGDT GSLALGGALG AIAVAAKHEL VLAIIGGLFV LEAVSVIVQV ASFKLTGKRV FRMAPLHHHF EQKGWAEPTV VVRFWIISVV LAMAGLATLK LR
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