| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2396 |
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| Symbol | |
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| ID | 5455152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2582991 |
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| End bp | 2584610 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877971 |
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| Product | histidine kinase |
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| Protein accession | YP_001413662 |
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| Protein GI | 154252838 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.106517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGA AATATCTGAG CGATCAGGAA ATGGCGGCGA TCGTGCGGGA GGCGGTGGAC
CGTCTGCCCG GCGGCTTCGT CATCTTTGGC CCCGACCACG AAATCCTTCT GTCCAACGCG
CAGAACGAGC GCGATTTTCC CTTCACCAAC GAGGCGCTCC GCCAGGGCAA GACTTATCTC
GAGGCGACGC ATTTCGCGGT CAAGAAGGTC GCGCCCGATT TGCCGGACGA AGTGGCGCTT
TCGGTGGCGC GAAACATTCA CGATACATTG GCGAAGGGTG AGCCGGTCGA GTTGAGAACC
CATCTCGGCA CGGTCATGCA GGTCATCGAG ATTCCGCTTT CCTTCGGCGG CTGGGTTGCT
GTCGGGGCCG ATGTTACGGC GCTTCGCGAG CGCGAACGCG AATTGAAAAA GTCGCGCAAG
CAGGCCGAGG CCGCCAATGA GGCGAAGTCC GCATTCCTGG CCAATATCAG CCATGAAATC
CGCACGCCGC TGAACGGTAT TCTCGGCATG GCGCAGCTCA TGGCGTCAGG CGATCTCACG
CCCGGGCAGA AGGACCAGAT CGAGACGATC CTCGATTCCG GCAAGACGCT GATGGCGCTT
CTCAACGACG TGCTGGACCT CTCCAAAATC GAAGCCGGCC GCTTCGACAT TTCGCCCATC
GACAATGATC TCGGGCAGTT GTTGCGCCGC ATGGAAAAGC TCTGGGCGCC CCGCGCGTCG
GAAAAGGGGC TCGTCCTCAC GCTCGATATA AACAGCGCCA TGCCGGAGCT CTTGCGGTTC
GATCCGATCC GCGTGCGCCA ATGCGTCTCC AACCTCGTTT CAAATGCGAT CAAGTTCACC
GAGCGGGGCA GCGTGCGCGT TGCCGCGCGC TGCGTTCCCG CCGGCGAAGG CGAGTTCGAT
GTGCTTGTCG AAATTTCGGA TACCGGCATC GGCATGAGCG GCGAGACACT CGGCAAGCTT
TTCGCGCCTT TCACACAGGC CGATGCTTCC ACCTCGCGCC GCTTCGGCGG CACCGGCCTC
GGCCTGTCGA TCAGCCGCAA GCTCGCGCAA TTGATGGGTG GCGATGTGGT GGCCGAGAGC
GAGGAGGGCA GGGGCTCCCT CTTCACGCTC ACCTTCCGCG CCGCCGAAGG CCGCCGCGTC
AGCGAAGCGC CGCAAAACGC CGATGTCGAC CAGACAGGCG GCGCGCGCTG GGCGAAAGGT
CTCGCCGTCC TGCTGGTCGA CGATCATCCG CTCAATCGCA AGGTGGCGCG TCTTTTCCTC
GAACCGCTCG GCATCGCAAT CACGGAAGCC GAAAACGGTG AAGAGGCGCT GCGCTGGTTG
CAGACGCAAC CCTTCGACCT TGTGCTGCTC GACATGCACA TGCCGGTGAT GAACGGTATG
GAGACGCTGG CTCATATTCG TGCGCATGAG CCGCATATCC GCGACCTGCC GGTCATTGCG
CTGACGGCTG ACTCGCTCGG CCCCGACAAT TCCCGCTACC GCGATTTCGG CGCCGATGGC
TATGTCGGCA AGCCGATGGA CCATCGCGAT CTCATTCTGG AAATCGGCCG CGTGCTGGAA
GAAAAGCATG GCCGCGCACC CATGCCGCGC GAAGCCATGC CGGATCTGCG CCGCGCCTGA
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| Protein sequence | MDEKYLSDQE MAAIVREAVD RLPGGFVIFG PDHEILLSNA QNERDFPFTN EALRQGKTYL
EATHFAVKKV APDLPDEVAL SVARNIHDTL AKGEPVELRT HLGTVMQVIE IPLSFGGWVA
VGADVTALRE RERELKKSRK QAEAANEAKS AFLANISHEI RTPLNGILGM AQLMASGDLT
PGQKDQIETI LDSGKTLMAL LNDVLDLSKI EAGRFDISPI DNDLGQLLRR MEKLWAPRAS
EKGLVLTLDI NSAMPELLRF DPIRVRQCVS NLVSNAIKFT ERGSVRVAAR CVPAGEGEFD
VLVEISDTGI GMSGETLGKL FAPFTQADAS TSRRFGGTGL GLSISRKLAQ LMGGDVVAES
EEGRGSLFTL TFRAAEGRRV SEAPQNADVD QTGGARWAKG LAVLLVDDHP LNRKVARLFL
EPLGIAITEA ENGEEALRWL QTQPFDLVLL DMHMPVMNGM ETLAHIRAHE PHIRDLPVIA
LTADSLGPDN SRYRDFGADG YVGKPMDHRD LILEIGRVLE EKHGRAPMPR EAMPDLRRA
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