Gene Plav_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2371 
Symbol 
ID5456434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2558499 
End bp2559074 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content62% 
IMG OID640877947 
Producthypothetical protein 
Protein accessionYP_001413638 
Protein GI154252814 
COG category[S] Function unknown 
COG ID[COG4185] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.340146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCC TTGCCGGGCC GAACGGCGCC GGCAAGTCTA CGCTCTATGC GACCCGCGTC 
GCTCCCGGCT TCGCGGGTCC GTTCATCAAT GCCGACATCA TCCAGCGCAA CGAACTACGC
GATCCTTCGC CAGAGGCGTC CTATGAAGCA GCGCGCATCG CCTCCTCGCG CCGTGCGGAG
TTTGTCATCC AGCGGCGGGA TTTCGTCACC GAAACCGTCT TCTCGCACCC CTCCAAGCTT
GAACTGATCG GCGAAGCCCG CGCCAACGGA TTTACCGTCA TCGTGATGCA TGTTGGGGTC
GAGACGGCCG AACTCTCCGT GGCCCGTGTC GAAGCGAGAG TCGAAGAAGG CGGGCATATC
GTGCCGGTGG ACAAGATCCA CGCGCGGTAT AACCGCAGCG CGCCGCTCAT CCGTGATGCT
GTTCTCCAGG CCGACCGCGG GATGGTATTT GACAATTCCC GCCTCAACCT GCCGCCGCGC
CACTGCCTGA CATTCGCGAA CGGGCGATTG GTGTTCGCCT TGCCACGCTT GCCGACGTGG
GTCAGATCAA CTTACGACTC AGACCTCATA GTCTAG
 
Protein sequence
MIVLAGPNGA GKSTLYATRV APGFAGPFIN ADIIQRNELR DPSPEASYEA ARIASSRRAE 
FVIQRRDFVT ETVFSHPSKL ELIGEARANG FTVIVMHVGV ETAELSVARV EARVEEGGHI
VPVDKIHARY NRSAPLIRDA VLQADRGMVF DNSRLNLPPR HCLTFANGRL VFALPRLPTW
VRSTYDSDLI V