Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2358 |
Symbol | |
ID | 5453925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2544892 |
End bp | 2545593 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640877936 |
Product | response regulator receiver protein |
Protein accession | YP_001413627 |
Protein GI | 154252803 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.119902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.5156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTTG ATCAGACGCA AAGGCGAAGT TCGGCGCCAT TTTCATCGGC ACCGGAGAAT GCGGAAAAAC AGCCAATCGT CATTATTGTC GATGACGATC CCACTGTCCG TGAAGCATTG TCCGAGTTGA TCCTCTCGGC GGGCTTCCAA ATGGCCTGTT TTGCTTCGAC CCGCGAACTG CTGGACGGTG ACGCGTTGGA CAGTCACGGT TGCCTGATTC TCGACGTCCG CATGCCAGGG GCGAGCGGTC TCGATCTGCA GCATCATCTC GCGGAGAGCG GAAACACAAA GCCGATCATC TTCTTGACGG GACACGCGGA TATTCCAATG ACCGTGCAGG CGATGAAGGC GGGTGCCGTT GACTTCCTGA CCAAACCGGT GAGGGACCAG ACTCTGATCG ACGCGGTGAA CGCTGCCATT ACCGTCGATG CTCAACGGAG AGCGGAATCT GCGGTCACGG AGCGCAATAT CGAACGTTAC AGGACGTTGA CACCACGAGA GCATGAAGTC CTGTATGAAG TCGCGCGGGG ACGCGTCAAC AAGCAGATCG CATTCGACCT GGGTATCAGT GAAGTCACCG TGAAGCTGCA TCGCGGCAAT GTGATGCGCA AGATGGAGGC TGCTTCTATC GGTGAGTTGA TCCGGGCGTG GGAATCGCTG CCCCCACAAT TGCGTGAAGC TGCTGCGCGA CCCGTTCTCT GA
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Protein sequence | MRLDQTQRRS SAPFSSAPEN AEKQPIVIIV DDDPTVREAL SELILSAGFQ MACFASTREL LDGDALDSHG CLILDVRMPG ASGLDLQHHL AESGNTKPII FLTGHADIPM TVQAMKAGAV DFLTKPVRDQ TLIDAVNAAI TVDAQRRAES AVTERNIERY RTLTPREHEV LYEVARGRVN KQIAFDLGIS EVTVKLHRGN VMRKMEAASI GELIRAWESL PPQLREAAAR PVL
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