| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2328 |
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| Symbol | |
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| ID | 5453566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2506554 |
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| End bp | 2508593 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877908 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413599 |
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| Protein GI | 154252775 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.337354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000143691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGGCG CCAGCATGCA GATCACATCC GCCGACTACT CCGCAGCGTT GAACCATGTC
GCACGCATCG CCCCACGCTA TGAAAAACTC AATCCGGAAG CGTTGAACTG GAGCGAAACG
GACTGGCGCA ATCTTCATGA GCTGCGCGAG AAGCTGCTGG CCGATGTCGG CGCGTCGATG
CGCAAGCGTG GCGTGGCGGA GGAGGCAGTT TCGAAGCAGC TTCGCCTGCT GACGCTCGCC
ATGCTCGACT ACGAGCTGAC ACATCTTCTG CCGCTGCACA TGAAAGCCTG GCTCGAAGGC
TTCGACACGG AGATTCCGGG CGGGGCCTAT GCCGCCTTCT TCGCCCCCTG GCACGATCAC
CTCGCCCCCT CGGCTGCGAC GCAGGACGAT CTCGTTGCGG TGTACGACGA TCTCTCGCAT
CACTTTCCGG GCTATGCGAC CTGGCGGAAG ATGGAGCATG ACGCCGCAAC CGGCATCGAG
GACGTGATCC TGGATGCGGA ACTGATCGAA TATCAAAACG CTTTCCGAAC GGCGAAGCAG
AAAGAAGCAA AGCCTGCGGC GCCGAACACT CCCGCTCCCG CCGCCGCTGC ACCGAAGGCG
GAGGCTGCAC CCGCAACGGC GAAGCCGCAG GTCACACTCT CCTTTCGGGA GCGCCTGCGC
CGGCAAGGGG AAGACGAGAC AGCGCCCGGC TGGACGGCGG TTTTCTTCTT CTGGCTCCTG
CTGGCGACGG TGCTCACCGC ACCGGTGGCG GCGGTTGCGG CGCTGATCGG ACATGAAGGC
ATCGCACCGA ACTTCGGGGC GATTGCCGGA GCTGCACATG TTCTTGCAGC GGCGCTGATG
CTGGGCGTCA GGTTTCTTAC CGGCCGCAGT CTCGCCGCAT GGGCGACGCC GCGGCAGTGG
AGGTCGGAGG CCGGCTGCTT CTGGTTCGGC ATCGTTGCGG GGCTGACGGT TCTGGCCACG
CTGGCGGGTG GCCTCGCAAA CTATATCGGC CCCAACATGG ACCGCGCCGA GACCGTGCCG
CTCGCCATCG GCACTGCGGT CTTTTTCGGA CTTGCCGCGC TGGCCGGCTA TTTCTGGCAT
CGCCATGAAA AAGATTTTCC GGCGGCGCGG CGCACGACCG AGCTCTACGA GGTGGATGAC
AATCCGATCC AGTGGTGGCA GGTCGCGGCC GGCCTCTTCT TTCTTCTCGT ATTCGCGGCC
TATGGCTTCC TCGCCTTCGA TGTGCTGCCG CCGGTGGCCT TTGCGGGCGG CCTGTTCGTG
GCGGCGCTGG CGGGGTGGTT CTTCAGCAAT GGCGGCAGCC TGGTCTTCAC GCTCGTTGCG
ACCGCCTTCG TCGCGACCGT GCTGCACGCG ATGGTGGCGC CGCCGCCCGC GCTTCTCTTC
GCGCTGCTCG CGGGCGCGGC TTTCGCGCTG GGGCTCAAGC TTTTCCATAC GCTGCGCCGC
CAGCGGCGTT CATGGGTCAT GAACGCGCTT GTCATCGCCT CGGGCGCTTT CCTCTTCGCC
TATCTGCCGA TGGAAAGGCC GGTGGCCTAT TATCTCTCCT ACGTGGCGGG GCCCCTTGCC
CGGCCCGCCG CCGACGCGTC GATCGACGCC TATCTGGCGC TGGAGGAAAC GCCGCTCGGC
AAGTCTTTTC TCGACACGCT TGGCGGCGTC GACGAAAAGG CGACGGCGGT GCGGGTCGTC
GAGGCGACGA ATGTCGACAA GGACCGCACG GAAATTCTTT TCGTGATGAG CAATGCGGGC
GACCTGCTGA TCCGCGAAGT GACATTCACG GTGAACGGCA GCTGCGCCGG CAAGCCGATG
CCCCTGCGTT TCGCCAAGGC AATCGCACCG GGCGACGAGG CGGGGCTGAA GATCACCCTC
TCCCGCCCGG ACGATTGCAG CGACGATGAC TGGTCTAACT GGACGAAAAG CGTGTCGCGC
GGCTGGTGGG AGAACCGGTC GAGCCCCATC ATGGTGACGG TTATCGAGGC GGAGAGCTAC
GACCCGAAAG CACTCTTCAA GGAAGAAGCA CTTGCCTGGC TCGAACTGAG GGAGGAGTAG
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| Protein sequence | MSGASMQITS ADYSAALNHV ARIAPRYEKL NPEALNWSET DWRNLHELRE KLLADVGASM
RKRGVAEEAV SKQLRLLTLA MLDYELTHLL PLHMKAWLEG FDTEIPGGAY AAFFAPWHDH
LAPSAATQDD LVAVYDDLSH HFPGYATWRK MEHDAATGIE DVILDAELIE YQNAFRTAKQ
KEAKPAAPNT PAPAAAAPKA EAAPATAKPQ VTLSFRERLR RQGEDETAPG WTAVFFFWLL
LATVLTAPVA AVAALIGHEG IAPNFGAIAG AAHVLAAALM LGVRFLTGRS LAAWATPRQW
RSEAGCFWFG IVAGLTVLAT LAGGLANYIG PNMDRAETVP LAIGTAVFFG LAALAGYFWH
RHEKDFPAAR RTTELYEVDD NPIQWWQVAA GLFFLLVFAA YGFLAFDVLP PVAFAGGLFV
AALAGWFFSN GGSLVFTLVA TAFVATVLHA MVAPPPALLF ALLAGAAFAL GLKLFHTLRR
QRRSWVMNAL VIASGAFLFA YLPMERPVAY YLSYVAGPLA RPAADASIDA YLALEETPLG
KSFLDTLGGV DEKATAVRVV EATNVDKDRT EILFVMSNAG DLLIREVTFT VNGSCAGKPM
PLRFAKAIAP GDEAGLKITL SRPDDCSDDD WSNWTKSVSR GWWENRSSPI MVTVIEAESY
DPKALFKEEA LAWLELREE
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