Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2313 |
Symbol | |
ID | 5453824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2480730 |
End bp | 2483969 |
Gene Length | 3240 bp |
Protein Length | 1079 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877892 |
Product | carbamoyl-phosphate synthase, large subunit |
Protein accession | YP_001413584 |
Protein GI | 154252760 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.417995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.014378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC GTACAGATAT CAAAAGCATC ATGATCATCG GCGCGGGGCC GATCATTATC GGGCAGGCGT GCGAGTTCGA TTACTCCGGC ACGCAGGCCT GCAAGGCGCT GAAGGACGAG GGCTACCGGA TCATCCTGGT GAACTCGAAC CCCGCCACGA TCATGACGGA CCCGGAGCTG GCGGACGCGA CCTATATCGA GCCGATCACG CCGGAAGTCG TCGCGAAGAT CATCGAAAAG GAACGGCCCG ACGCACTGCT GCCGACCATG GGCGGACAGA CCGCGCTCAA CACCGCGCTG GCGCTTGCCG ACATGGGCGT GCTGGAAAAA TTCGGCGTCG AGATGATCGG CGCCAAGCGC GAAGCGATCG AGATGGCCGA AGACCGCCAG CTCTTCCGCG ACGCGATGGA CCGCATCGGC CTCGAAAGCC CGCGCTCGCG CGTCGCCCAC AATATGGAAG AAGCCCTTGC GGCGCTTGAG TTCGTCGGCC TGCCCGCGAT CATCCGCCCC TCCTTCACCA TGGGCGGCAC GGGCGGCGGC ATCGCCTATA ACCGGCAGGA ATTTTCCGAC ATCATCGAAA GCGGCCTCGA CGCGAGCCCG GTGAACGAAG TGCTGGTCGA GGAAAGCGTG CTCGGCTGGA AGGAATACGA GATGGAAGTC GTCCGCGACA AGGCGGACAA CTGCATCATC ATCTGCTCCA TCGAAAACGT CGACCCGATG GGCGTCCATA CCGGCGACTC GATCACGGTC GCCCCCGCGC TGACGCTGAC AGATAAGGAA TACCAGGTGA TGCGGAACGC GAGCATCGCC GTGCTGCGCG AGATCGGCGT CGAGACCGGC GGCTCCAACG TGCAGTTCGC CGTCAACCCG AAGGACGGCC GCCTCGTCGT CATCGAAATG AACCCGCGCG TCTCGCGCTC CTCGGCGCTC GCCTCCAAGG CGACGGGCTT TCCGATCGCG AAGGTCGCCG CAAGGCTCGC CGTCGGCTAC ACGCTGGACG AACTCAGAAA CGACATCACC AAGGTCACGC CCGCGAGCTT CGAGCCGACC ATCGACTATG TTGTCACGAA AATTCCGCGC TTCGCCTTCG AGAAATTCGC GGGCGCCGAA AAGCTGCTCG GCACGGCAAT GAAATCCGTC GGCGAAGCCA TGGCCATCGG CCGCACCTTC CAGGAGTCGC TCCAGAAGGC GCTGCGCTCG ATGGAAACGG GCCTCACCGG CCTCAACGAA GTGACCGTGC CCGGCATGGG CGAAGGCGAC GACAAGAACG CCATTCGCGC CGCGCTCGGC CGCCCGACGC CGGACCGCCT GCTCGTGATC GCGCAGGCGC TGCGCGAGGG CATGAGCCAC GATCAGATAC AGGCCTCCTG CTCCTACGAT CCCTGGTTCA TCGAACAATT GCAGGGCCTC ATCGACGCGG AAGCGGAAGT GCGTGGCAAA GGCCTGCCGC AGACGAAAGC GGAAATGCGC CGCCTGAAGG CGATGGGATT TTCCGATGCG CGGCTCGCGG AACTTGCAAG GAGCGAGGAG GAAGCCGTGC GCAAGGCGCG GCGCGAGATG GGCGTGCGCC CGGTCTACAA GCGCATCGAT ACCTGCGCGG CCGAGTTCGA AAGCCTGACG CCCTACATGT ATTCGACCTA TGAGACCGAT TTCGACGGCA AGGCCGATTG CGAGGCCGAT CCTTCCGGCC GCAAGAAGGC GATCATCCTC GGCGGCGGAC CGAACCGCAT CGGCCAGGGC ATCGAATTCG ACTATTGCTG CTGTCATGCG GCTTTCGCAC TCGCCGAAAT CGGCATCGAA AGCATCATGG TCAACTGCAA CCCGGAAACC GTGTCGACCG ACTACGACAC GTCCGACCGG CTCTATTTCG AACCGCTGAC CGCCGAAGAC GTGCTGGAAC TGATCGACCT TGAAATGTCG AAGGGAACAC TGCTCGGCGT CATCGTTCAG TTCGGCGGGC AGACGCCGCT GAAACTCGCG AACGACCTCG AACGCGCCAA GGTGCCGATC CTCGGCACCT CGCCCGACGC CATCGACCTC GCCGAAGATC GCGACCGCTT CTCCGCGCTG CTCGAAAAGC TCGGCCTGAA GCAGCCGCCG AACGGCATCG CGCGCTCCGC CGCCGAAGCG AAGATGATCG CCGAGCGCAT CGGCTACCCG GTCGTCATCC GCCCCTCCTA CGTGCTGGGC GGCCGCGGCA TGGAAATCGT GCGCGACGCG GCGCATCTCG ACCGCTACAT CAACGAAGCG GTGATCGTGT CCGGCAAGAG CCCTGTGTTG ATCGACTACT ATCTGCGCGA CGCCATCGAG GTGGACGTCG ATGCGCTCTG CGACGGCAAG GACGTCGTCA TCTGCGGCAT CATGGAGCAT ATCGAGGAAG CTGGCGTTCA TTCCGGCGAC AGCGCCTGTT CGCTGCCGCC CTATTCGCTG AAACGCGAAA CCATTGCCGA GATCGAACGT CAGACGCGCG ACATGGCGCT GGCGCTGAAT GTCGGCGGGC TGATGAACGT GCAATACGCG ATCCAGGACG GCACGATCTA TGTGCTCGAA GTGAACCCGC GCGCCTCGCG CACCGTGCCC TTCGTCGCAA AGGTGATCGG CGAGCCGGTG GCGAAGATTG CGGCCAAGGT CATGGCGGGC GAAAGCCTTG CAAGCTTCAA CCTGAAGCCG GATGCGCATG GCCGCGTCGC GGTGAAGGAA GCGGTCTTCC CCTTCGCGCG CTTCCCCGGC GTCGATACGA TCCTCGGGCC GGAAATGCGC TCGACCGGCG AAGTAATGGG CCTCGACAGG AGCTTCGCCG TCGCCTTCGC CAAGAGCCAG CTCGGCGGCG GCACCAAGGT GCCGGTGACC GGCACCGTGT TCGTGTCGGT GAAGGACAGC GACAAGGCGA AGATCGTGGC GCCCGCGAAG AAACTCCTCG ACATGGGCTT CAAGCTGGTC GCGACGGGCG GCACGCAGCG CTATCTCGCG GAACAGGGCA TTGAGGTCGG CACCATCAAC AAGGTGCTCG AAGGCCGGCC GCACATCGTA GACGCGATCA AGAACGGCGA GGTCGCCCTC GTCTTCAACA CCACGGAAGG CGCCCAGGCG CTCTCCGACT CGATGTCGCT CCGCCGTTCG GCCCTGATGA TGAAGGTGCC TTATTATACG ACCGTGGCGG GCGCCCGCGC GGCCGTGGAA GGCATCGACG CCATCCGCAA GGGTCAACTG GAAGTCGCGT CCCTCCAGTC CTATATTTAA
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Protein sequence | MPKRTDIKSI MIIGAGPIII GQACEFDYSG TQACKALKDE GYRIILVNSN PATIMTDPEL ADATYIEPIT PEVVAKIIEK ERPDALLPTM GGQTALNTAL ALADMGVLEK FGVEMIGAKR EAIEMAEDRQ LFRDAMDRIG LESPRSRVAH NMEEALAALE FVGLPAIIRP SFTMGGTGGG IAYNRQEFSD IIESGLDASP VNEVLVEESV LGWKEYEMEV VRDKADNCII ICSIENVDPM GVHTGDSITV APALTLTDKE YQVMRNASIA VLREIGVETG GSNVQFAVNP KDGRLVVIEM NPRVSRSSAL ASKATGFPIA KVAARLAVGY TLDELRNDIT KVTPASFEPT IDYVVTKIPR FAFEKFAGAE KLLGTAMKSV GEAMAIGRTF QESLQKALRS METGLTGLNE VTVPGMGEGD DKNAIRAALG RPTPDRLLVI AQALREGMSH DQIQASCSYD PWFIEQLQGL IDAEAEVRGK GLPQTKAEMR RLKAMGFSDA RLAELARSEE EAVRKARREM GVRPVYKRID TCAAEFESLT PYMYSTYETD FDGKADCEAD PSGRKKAIIL GGGPNRIGQG IEFDYCCCHA AFALAEIGIE SIMVNCNPET VSTDYDTSDR LYFEPLTAED VLELIDLEMS KGTLLGVIVQ FGGQTPLKLA NDLERAKVPI LGTSPDAIDL AEDRDRFSAL LEKLGLKQPP NGIARSAAEA KMIAERIGYP VVIRPSYVLG GRGMEIVRDA AHLDRYINEA VIVSGKSPVL IDYYLRDAIE VDVDALCDGK DVVICGIMEH IEEAGVHSGD SACSLPPYSL KRETIAEIER QTRDMALALN VGGLMNVQYA IQDGTIYVLE VNPRASRTVP FVAKVIGEPV AKIAAKVMAG ESLASFNLKP DAHGRVAVKE AVFPFARFPG VDTILGPEMR STGEVMGLDR SFAVAFAKSQ LGGGTKVPVT GTVFVSVKDS DKAKIVAPAK KLLDMGFKLV ATGGTQRYLA EQGIEVGTIN KVLEGRPHIV DAIKNGEVAL VFNTTEGAQA LSDSMSLRRS ALMMKVPYYT TVAGARAAVE GIDAIRKGQL EVASLQSYI
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