Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2306 |
Symbol | |
ID | 5453344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2472854 |
End bp | 2473459 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877885 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001413577 |
Protein GI | 154252753 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.160538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTC TCGTAGGCAA ACAGGCCCCC GATTTCACCG CCGCTGCCGT CCTGCCGGAT GGCGATATCG TGGAGGACTT CAATCTCCGC AATTATCTCA ACGGCTCTTA CGGGCTCGTT TTCTTCTATC CGCTCGACTT CACCTTCGTT TGCCCTTCGG AAATCCTCGC TTATTCGAAC CGCGTGCCGA AGTTTGAGGC GATGAACGTC AAGGTGATCG CGGTCAGCGT CGACAGCCAG TTTACGCATG CCGCCTGGCG CAACACCGCT CCGAACGATG GCGGCCTCGG CCCGGTCAAG TTCCCGATGG TGGCCGACAT GACGAAGCAG ATCGCGCGCG ACTATGACGT GCTGATCGAA AAGGACGGCG TGGCGTTGCG CGGCACCTTC CTGATCGACC GCGAAGGCGT GGTCCGCCAC CAGCTCGTCA ACGACCTGCC GCTCGGCCGC AACGCCGACG AGGCGCTCCG CATGGTCGAT GCGCTGCAGT TCCACGAGGA ACATGGCGAA GTCTGCCCCG CTGGCTGGCA GAAGGGCCAG GAAGGCATGA AGGCGGACGC CGCCGGCGTT GCCAAATATC TCGGCGCCCA CGCCGAGGCC CTCTAA
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Protein sequence | MAVLVGKQAP DFTAAAVLPD GDIVEDFNLR NYLNGSYGLV FFYPLDFTFV CPSEILAYSN RVPKFEAMNV KVIAVSVDSQ FTHAAWRNTA PNDGGLGPVK FPMVADMTKQ IARDYDVLIE KDGVALRGTF LIDREGVVRH QLVNDLPLGR NADEALRMVD ALQFHEEHGE VCPAGWQKGQ EGMKADAAGV AKYLGAHAEA L
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