| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2297 |
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| Symbol | |
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| ID | 5456484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2464720 |
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| End bp | 2466225 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640877876 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001413568 |
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| Protein GI | 154252744 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.35156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTC CCCTCCCCCT CGGTACCCTC GCCCTCGACA ATGAGGCCCA GACCCCGCTT
TACCGCCAGC TCTATGATGC CTTGCGCGAG GCCATTCTCG ACGGACGTCT CCATCCCGGC
GCCCGCCTTC CCTCCTCGCG GGTACTCGCG GGCGATCTCG GCGTCGGCCG CAACACCGTG
CTCGCCGCTT ACGATCAATT GACGGCGGAG GGCTATCTTG AAGGTCAAGT GGGCTCGGGA
ACGCAGGTGG CTGCGATCCT GCCGGACAGC CTCTTGCAGC TTGACCGTCA GGCGCGGGCG
ATGCCGCTGA AAATCGCCGC GAGCAACATG CGCAAACTCT CGAAGCGCGG CGAGGCCCTG
TCCGCCACGC GCCGCCTCGC CCCCGCCTAC AAGCGCGGTC AGGGGCAGGC CTTCCAGCAC
GGCCTCCCCG CCATCGACCA GTTTCCCGCC TTGCTTTGGA GCCGCCTCCT CGCCCGCCAC
GCGCGCGACC CCCGCAATGG CTGCTTCGGC TACGAGGTGG GAATGGGCCT ACCGGCCCTG
CGCGAGGCGA TCGCCGCTTA TGCGGGCGCG GCGCGCGGCG TCGTCTGTAC GGCGGATCAG
GTAATCGTGA CCGTCGGCGC ACAAGGCGCT CTCGATCTCG CGGCGCGCAT GCTGCTAGAT
CCGGGCGATC CGGTCTGGGT CGAGGACCCC GGCTATCTCG GCGCCCGCGG CGCATTTCTC
GGCGCCGGCG CAGAACTTGT CCCCGTTCCC GTCGACGGCG AGGGCATCGA CGTCGAAGCA
GGCATCGCGC GCCACGAAAC GCCGAAGCTC ATCTATGTGA CGCCCTCCCA CCAGTTTCCG
CTGGGCGCGA CGCTCTCTCT TCCCCGCCGC CTCGCCCTCC TCGATCACGC CCGCCGCTCC
GGCGCCTGGA TCCTCGAAGA CGACTACGAT TCCGAATACC GCTATCAGGG CCGCCCCATC
GCCTCGCTTC AGGGCCTCGA CCGCGCCGGC ACCGTCATCT ACATGGGCAC CTTCGCCAAG
ACGCTCTTTC CCGCCTTGAA GATCGGCTAT CTCATCGTCC CCCAAAATCT CGTCGACGCC
TTCGCCACCG CCATCCGCAT CACCGGTCAC GTGCCCCCCA CCGCCGTCCA GGCGGCGCTG
GCGGATTTCA TCGGCGAAGG CCATTTCGGC GGCCATGTCC GCCGCATGCG CGCGCTTTAT
GCAGAGCGCC GCAACATCCT CCTTCGCGCG CTGGAAAACG AATTGTCGCC CTGGCTCCGC
GCGGCTCCCG GCGAGGGCGG CCTGCAGCTA TCGGCCTTCC TCGCCGACAC CGCCGACGAC
AGGGCGATGG CGAGGGCAGC TTCCGAAGCC GGCATCCATG TGAGCCCGCT CTCGCTCTAC
CGTCTGGAAG AAGGCCGGCC GGGCTTGTAT ATGGGCTACG CCTCGGTGCC CGAGACCGAC
CTCGCCAAAT CCGCCGGGCG CCTGGCCGCC ACCCTGAAGG CTGCCGGATG CCCCCGGCAC
ATATGA
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| Protein sequence | MASPLPLGTL ALDNEAQTPL YRQLYDALRE AILDGRLHPG ARLPSSRVLA GDLGVGRNTV
LAAYDQLTAE GYLEGQVGSG TQVAAILPDS LLQLDRQARA MPLKIAASNM RKLSKRGEAL
SATRRLAPAY KRGQGQAFQH GLPAIDQFPA LLWSRLLARH ARDPRNGCFG YEVGMGLPAL
REAIAAYAGA ARGVVCTADQ VIVTVGAQGA LDLAARMLLD PGDPVWVEDP GYLGARGAFL
GAGAELVPVP VDGEGIDVEA GIARHETPKL IYVTPSHQFP LGATLSLPRR LALLDHARRS
GAWILEDDYD SEYRYQGRPI ASLQGLDRAG TVIYMGTFAK TLFPALKIGY LIVPQNLVDA
FATAIRITGH VPPTAVQAAL ADFIGEGHFG GHVRRMRALY AERRNILLRA LENELSPWLR
AAPGEGGLQL SAFLADTADD RAMARAASEA GIHVSPLSLY RLEEGRPGLY MGYASVPETD
LAKSAGRLAA TLKAAGCPRH I
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