Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2227 |
Symbol | |
ID | 5455387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2400839 |
End bp | 2401822 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877806 |
Product | periplasmic solute binding protein |
Protein accession | YP_001413498 |
Protein GI | 154252674 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.82387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCC TGAAAACCAT CTGCGCCGCC CTTGCCGCAT CGCTCCTGTT TTTCGCCGCG CCCGCCACGG CCGAACCGCT GAAAGTGGTG GCGAGCTTCA GCATTCTCGG CGACATCGCG CGCGAGATCG GCGGCGACCG GACGGATGTG GCGGTGCTTG TCGGCCCCGA TGGCGATGCC CATTCCTTCG AGCCGGGCCC CGCCGATGCA AGCGCGCTGG CGGATGCCGA TGTGCTGGTG CTGAACGGCC TCGGCTTCGA GCCCTGGATG GTCCGCCTCG CCGCCGCCGC GCGCAGCAAG GCGAAATATG TCACGGCAAG CTTCGGCGTC GGCCCACGCC GCCTCGGCGA AAACGCGCAT AGTCACGGCC ATGATGATGA CCATGACCAC GACCACGACC ACGACCATGA CAAAAAGAAT CACGACGAAG ACGGCTACCC GAAAACGGCC CGCGACTTCG ATCCCCATGC CTGGCAGAAC CTCGCAAACG GCATGATCTA CGCGCAGAAC ATCGCGGATG GCTTCGCGGA AGCCGATCCC GACAACGCGC TCTTCTACAA GGCGAATGCC GAGCGGTACA TCGCCGAGCT GAAGGAACTC GACCGCTGGG TGAAATCGGA AATCGCCAAG GTGCCGGCGG AAAAGCGCAA GGTCATCGCC ACGCATGACG CCTTCGGCTA TTTCGGCGAT GCCTATGGCG TCGAATTTCT CGCGCCTCTC GGCGTCGGCA ATGAAGCGGA GCCGAGCGCG CAGGCGCTGG CGCGGCTGAT CGACCAGATC CGCGCCGAAA ACATCAAGGC GCTCTTCATC GAGAACATGT CGGACCCGCG CATGATGGAA ACCATCGCCC GCGAAACCGG CGCAGAAATG GGCGGCGAAC TCTATTCGGA CGCGCTCTCC CCCGAAGGCG GCCCCGCCGC CACCTACATC GCCATGTTCC GCCACAACGT GCCTGTCCTC GTCAGCACGA TGCAGAAGAA CTGA
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Protein sequence | MTSLKTICAA LAASLLFFAA PATAEPLKVV ASFSILGDIA REIGGDRTDV AVLVGPDGDA HSFEPGPADA SALADADVLV LNGLGFEPWM VRLAAAARSK AKYVTASFGV GPRRLGENAH SHGHDDDHDH DHDHDHDKKN HDEDGYPKTA RDFDPHAWQN LANGMIYAQN IADGFAEADP DNALFYKANA ERYIAELKEL DRWVKSEIAK VPAEKRKVIA THDAFGYFGD AYGVEFLAPL GVGNEAEPSA QALARLIDQI RAENIKALFI ENMSDPRMME TIARETGAEM GGELYSDALS PEGGPAATYI AMFRHNVPVL VSTMQKN
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