Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2172 |
Symbol | |
ID | 5455712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2352147 |
End bp | 2352956 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877750 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_001413443 |
Protein GI | 154252619 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.244558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAC TGACTTCCAG CCGAGCCGCC CTTACGGATG AACTTCGCCG CATTGCGCTG GCCGCCGGCG AAGCGATTAT GGACCACTAC CGGACCGATT TTGAAGTCAT CCGGAAGGAC GACAACAGCC CCGTTACCGC CGCCGATCGC GACGCTGAGG CGCTGATCCT TGCGGGCCTT AAAGAGACAA TGCCGGAAGT CCCGGTCGTC TCGGAGGAAG CAGCCTCCGG AGGATATGTT CCCGAATTCG GCAACCGCTT CTTTCTCGTG GATCCGCTCG ACGGTACCAA GGAGTTCGTC AACAAGAACG GCGAATTCAC GGTCAACATC GCACTGATCG AGGACAGACT GCCGGTCGCC GGGGTGGTCT ACGCGCCGGC CAAGGAACGC ATGTTTTTCG GATATGGCGC CGGCGAAGCC TTCGAACAGA TCATCGCCCC GGGTAGCCGC GCTGCGGCCG GAGAAGCCCC GCGCCGGATC GCTGCCCGCA AGCCGGACGC CGATGGGCTG GTCGTGATCG CAAGCCGTAC GCATCGCGAC ACTAAGACCG ATGAATATCT CAATCTCTAC AAGGTGAAAG AATTCCTCGC TGCGGGCTCA TCGCTGAAAT TTTGCCTGAT TGCCGCCGGC GAGGCAGACC TCTATCCGCG GCACGGACGT ACGATGGAGT GGGACACCGC CGCCGGTCAC GCAGTTCTGC TTTCCGCAGG CGGCAGCGTG ACCCAGCTTG ATGGTACGCC GCTCATCTAT GGCAAAACCG AGCGCGGGCT CGATAACCCG TTCTTCGTGG CCCGGGGCGC ACCGGCTTAG
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Protein sequence | MTTLTSSRAA LTDELRRIAL AAGEAIMDHY RTDFEVIRKD DNSPVTAADR DAEALILAGL KETMPEVPVV SEEAASGGYV PEFGNRFFLV DPLDGTKEFV NKNGEFTVNI ALIEDRLPVA GVVYAPAKER MFFGYGAGEA FEQIIAPGSR AAAGEAPRRI AARKPDADGL VVIASRTHRD TKTDEYLNLY KVKEFLAAGS SLKFCLIAAG EADLYPRHGR TMEWDTAAGH AVLLSAGGSV TQLDGTPLIY GKTERGLDNP FFVARGAPA
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