| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2160 |
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| Symbol | |
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| ID | 5454755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2341247 |
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| End bp | 2342596 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877737 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001413431 |
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| Protein GI | 154252607 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG CACAGCCCGA CATTCTGGAC GTGCGCTTGG AAGCCGCCGA CATTCCACTC
GGGCATCTGG CGCGCAAGGA TGGCGGCTGC CGCTTCGCTT ATACGCCAGA CTATCTCGCG
CGCACCGACG CCATGCCGCT CTCGTTGTCC CTGCCGCTGC GCGAGGAACC TTACGGCGAT
GTCGAGTCAC GCGCCTTTTT CGACAACCTG CTACAGGAAA ACGATCAGCT TCAGCAGACG
ATGGACCGCG AACGTATCGC CCGCGACGAC ATTGTCGGCC TGCTGAGTTT TGTCGGCGGC
GACTGCGCGG GCGCGATCAG TTGCCTGCCG CCGGGAAGCG GCCCGGTCAA GGTTCCGGGT
AACCTCGCCA CGGATTACGA CGAACTGCCG CGCGAGGAAC TCATCGATAT CATGCGCCGC
CTCGCAGACA AGTTGCCCTT ACCGGACGCC ATAAAAGACC CGTCGCCGGT TGCAGGCGTG
CAGCGCAAGA TCGCGCTGAC AGAAATCGCG AAGGGCCGTT TCGGCCTGCC GAAGCCCGGC
CTGCGCGTGC CGACGACGCA TATATTGAAG GTGCCGGAGC GCCGACTGGC ACGCGAAGTG
TTGCTGGAAG CCGTTGCCAC GCGACTGGCG CATGCCGTGG GGCTCGAGGT CGCCATACCG
GCGGAATTCA AACTCGACGA CGAAGCCGGC TTGTTGAGCT TGCGCTTCGA CCGCCGCATC
GACGTCAATA GCGTGACGCG CATCCACCAG GAAGATTTCT GTCAGGCATT GGGCCTGCCT
GCTCGCCTCA AATATGAGCG CAACGGAACG GCAGAATTGC GCTTCGCGGC CACCGCCGTT
TCAGACCTGC TCGGCCGCAC CGCCGCGCCG GCAAGAGACA AGCGCAGCTT CATGGTGTCG
GCGTTTTTCA ATCTCGCGAT CGGCAATAAC GACAATCACG CGAAGAACCA TGCGCTGCTT
TACGACACGG GGCCTATACC GCGCCTTGCG CCGCTTTACG ACCTGCAACC CGTGCGGCTG
ACCGGGCGCT ATACCGACGA GCTGGCCTTC AGGATCGGCG CCGCCGACCG CTTCGACACG
GTGACGGCGG GCGACATCGC CGCTTTCATG GCGGCTTTCG GGCCGGGCAC GGCGACGGCG
CAGCGGCGCT TCATCGAGGG TGAAGTCGGG CCGATGCTGG CGGAGCTGGA CAGGCAGACG
GCTGTGCTGC CTTCGCATGG ATTGAAGGAT TTCGACGATC TGATCGGCCG CGAAATCTCG
CAGCTTGCGG ACCTGCTTGG GCTCAAGCTG GCGACCAGGG AGCGGGACTA TTTCACGGAA
AAGGGCGGCG GCTGGGGACA ATTGAGCTGA
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| Protein sequence | MSAAQPDILD VRLEAADIPL GHLARKDGGC RFAYTPDYLA RTDAMPLSLS LPLREEPYGD
VESRAFFDNL LQENDQLQQT MDRERIARDD IVGLLSFVGG DCAGAISCLP PGSGPVKVPG
NLATDYDELP REELIDIMRR LADKLPLPDA IKDPSPVAGV QRKIALTEIA KGRFGLPKPG
LRVPTTHILK VPERRLAREV LLEAVATRLA HAVGLEVAIP AEFKLDDEAG LLSLRFDRRI
DVNSVTRIHQ EDFCQALGLP ARLKYERNGT AELRFAATAV SDLLGRTAAP ARDKRSFMVS
AFFNLAIGNN DNHAKNHALL YDTGPIPRLA PLYDLQPVRL TGRYTDELAF RIGAADRFDT
VTAGDIAAFM AAFGPGTATA QRRFIEGEVG PMLAELDRQT AVLPSHGLKD FDDLIGREIS
QLADLLGLKL ATRERDYFTE KGGGWGQLS
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