Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2158 |
Symbol | |
ID | 5455650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2338837 |
End bp | 2340000 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640877735 |
Product | hypothetical protein |
Protein accession | YP_001413429 |
Protein GI | 154252605 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCCT TTCAATGCGG GGGAGCCAGA GTGCCGGAGA CTGACGCCGA ACGCGGCACG GAAGCGGCGG GCGGATTCAC GCCGGGACGC CGCGCGCGCA TCATGCGGGC GGAAACGGCG CTGGCGATCC TCGCCGTGCT CGCCATCCTC TATACGGCCT ATCTCGCGCA GAACCTCGTC GCGCCGATTA CGGCGGCGGT GGTCGGCAGT TTCATCTTCA TGCCGCTGAT GCGGGCGGCG CCCTTGCGCT TCCTGCCCGA CGCGCTTTCC GCCTCGATCA TCGTGGCGAC ACTGATCGGC GCGCTGGCGG GATCGGTCTA TCTTCTGGCG GAACCGGCGG CCGAATGGAC GGCGCGTATT CCCGCCGCAA TCGAGGAGTT CGAGGAGAAG TCGCGCGAGC TCTCCGAGCC GATGGCGGCG ATGCGGCGCG CCTCGAAGCA GGTCGAGGAA ATGACGCGGG CGGACGATGC ACCGCGCGAG GTCGTGGTGC GGGACGAAGG GCTTGTCGCG CAGGCGATGG AAGTGGCCGG GCAGAAGGGC GCCTCGATCC TCATCTTCAT CGTGCTGCTC TATTTCCTGC TGGCGACCGG CGAACTCCTG CGCGACCGCA TCATCCGCTC GGCCAAGCGG CTGACCGACA AGGAGCGCGC GCGGCGCATC CTCAGAAGCA TCGAGCGCGA AATCTCGACC TATCTGTTCT CGATCAGCCT CATCAATGCG GGGCTCGGCG TCGCCATCGG CCTTTCCATG TGGGCAATCG GGCTGCCCAA CGCGCTGCTC TGGGGCTTCG CCGCCGCGCT CTTGAACTTC ATTCCCTATG CGGGCGCGCT GGCCGGCATG GCGCTGACGG GCTTCGTCGC CTTCATGACC TTCGACAGCG TCGGCCATGC CCTGCTCGCG CCCGCCGCCT ATTTCCTCTG CAACCTCATC GAGTCGCAAT TCGTGACGCC GTCGGTGCTC GGCCGGCGGC ATACGCTGAA CGCGGCGGTG GTCTTCATCT CCATCGTCTT CTGGGGCTGG ATGTGGGGCG TCATCGGCGC GGTGCTGGCG GTGCCGATCC TCGTCATCCT CAACACCTGC TTCGCGCAGG TGGAAGGCCT GCGGAAATTC TCGCTCTTCA TCGACGGCAG CGCCAAGCCA AACGGCCCGA CGCTGCCGGA TTAA
|
Protein sequence | MAAFQCGGAR VPETDAERGT EAAGGFTPGR RARIMRAETA LAILAVLAIL YTAYLAQNLV APITAAVVGS FIFMPLMRAA PLRFLPDALS ASIIVATLIG ALAGSVYLLA EPAAEWTARI PAAIEEFEEK SRELSEPMAA MRRASKQVEE MTRADDAPRE VVVRDEGLVA QAMEVAGQKG ASILIFIVLL YFLLATGELL RDRIIRSAKR LTDKERARRI LRSIEREIST YLFSISLINA GLGVAIGLSM WAIGLPNALL WGFAAALLNF IPYAGALAGM ALTGFVAFMT FDSVGHALLA PAAYFLCNLI ESQFVTPSVL GRRHTLNAAV VFISIVFWGW MWGVIGAVLA VPILVILNTC FAQVEGLRKF SLFIDGSAKP NGPTLPD
|
| |