Gene Plav_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2101 
Symbol 
ID5453428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2283863 
End bp2284666 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID640877678 
Productinositol-phosphate phosphatase 
Protein accessionYP_001413372 
Protein GI154252548 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0413503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00162908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCGCC ACACCCCTTC AATGGCCGTC ATGGTTGCAG CCGCCCGCAA GGCCGCGCGA 
GGACTTCAGC GCGACTTCGG CGAGGTGGAA AACCTTCAGG TATCTCTGAA GGGCCCCGCG
AACTTCGTTA CCGCCGCCGA CAAGAAGGCC GAAAAGGTCA TCTTCCAGGA GCTTTCCAAG
GCGCGGCCGG GCTACGGCTT CCTGATGGAA GAAGGCGGTG TCGTAGAGGG CGCGGACAAG
TCGCATCGCT GGATCATCGA CCCGCTCGAC GGGACGACGA ACTTCCTGCA CGGCATTCCG
ATGTTCGCGA TCTCGATCGC ACTGGAACGC GAGGGGCAGC TGGTTGCAGG CCTCGTCTAC
AATCCGATAT CGGACGAGAT GTTCATCGCC GAAAAGGGCC AGGGCGCTTT CCTGAACGAC
CGTCGCCTTC GCGTCTCGGC ACGCCGCGAA ATGGACCAGG CGGTCGTCGC GACGGGTATT
CCTCATATCG GCCGTCCCGA TCATGAGCGC TTTTCGGTCG AGCTCAACGC CGTCATGAAC
GAAGTTGCCG GGATACGCCG CATGGGCGCC GCCTCGCTCG ACCTCGCCTA TGTGGCGGCG
GGTCGCTTCG ATGCCTATTG GGAAGCAAAC CTCGCCGCCT GGGATATTGC CGCCGGCATC
GTCCTCGTGC GCGAGGCGGG CGGCTTCGTG GCCGACTTCA ATGGCCGCGA TGACATGTTG
AACACCGGCG GCATTGTCGC CGGCAACGAC ATGCTGAGCC GCAAGCTGGG CGACGTCCTG
AAAAAAGCCC GCAAACCCGC CTGA
 
Protein sequence
MSRHTPSMAV MVAAARKAAR GLQRDFGEVE NLQVSLKGPA NFVTAADKKA EKVIFQELSK 
ARPGYGFLME EGGVVEGADK SHRWIIDPLD GTTNFLHGIP MFAISIALER EGQLVAGLVY
NPISDEMFIA EKGQGAFLND RRLRVSARRE MDQAVVATGI PHIGRPDHER FSVELNAVMN
EVAGIRRMGA ASLDLAYVAA GRFDAYWEAN LAAWDIAAGI VLVREAGGFV ADFNGRDDML
NTGGIVAGND MLSRKLGDVL KKARKPA